DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and LOC116406487

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_031760245.1 Gene:LOC116406487 / 116406487 XenbaseID:XB-GENE-29091511 Length:380 Species:Xenopus tropicalis


Alignment Length:326 Identity:86/326 - (26%)
Similarity:127/326 - (38%) Gaps:91/326 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 SATQQPNEYKCTQCGSICTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQL 231
            |.|.:|:....|:||...:......||:....:::..|..:..         :.:|         
 Frog    37 SNTAEPSPLNGTECGETSSLTKDCQGQRRSSTEEKLFVCAECG---------KTSP--------- 83

  Fly   232 QAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHH--HQQDQDLAGDQVALKVPPLTV 294
                         |.....::.:...|.:|.|.....:..|.  |..::              |:
 Frog    84 -------------QNANTGERNITCAQCKETQSFRISRLTHFVIHTGEE--------------TI 121

  Fly   295 KLNKNANGGA----IVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANPGVPAPASSGVLVGTQT 355
            ...::..|.|    :|||.::...|:|.:.::.|                 ...|....||    
 Frog   122 TCTESGKGFAQKNYLVSHMKIHTGEKPFTCTECG-----------------KGFAQKNYLV---- 165

  Fly   356 VPADLAHKIRH------KCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSN 414
                 :|...|      .|.:|.|.|.....|..|.|||||       |:|:|||.|||.|.|.|
 Frog   166 -----SHMKIHTGEKPFTCTECGKCFAHKNNLVCHLKIHTG-------EKPFTCSECGKGFAQKN 218

  Fly   415 TLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVHTTKL 479
            .|..|.:||||||||.|..|.|.|..|::|..|::.||||||:||..|.|.|||::.|..| .|:
 Frog   219 DLVSHMKIHTGEKPFTCTECGKGFIQKNHLVAHMKIHTGEKPFTCTECGKGFTQKNHLVAH-MKI 282

  Fly   480 H 480
            |
 Frog   283 H 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 53/112 (47%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 403..423 CDD:275368 10/19 (53%)
C2H2 Zn finger 431..451 CDD:275368 7/19 (37%)
zf-H2C2_2 443..468 CDD:463886 13/24 (54%)
C2H2 Zn finger 459..480 CDD:275368 9/20 (45%)
LOC116406487XP_031760245.1 C2H2 Zn finger 95..115 CDD:275368 4/19 (21%)
C2H2 Zn finger 123..143 CDD:275368 5/19 (26%)
zf-H2C2_2 135..160 CDD:463886 6/41 (15%)
C2H2 Zn finger 151..171 CDD:275368 5/45 (11%)
zf-H2C2_2 163..188 CDD:463886 8/33 (24%)
C2H2 Zn finger 179..199 CDD:275368 7/19 (37%)
COG5048 <203..347 CDD:227381 44/82 (54%)
C2H2 Zn finger 207..227 CDD:275368 10/19 (53%)
C2H2 Zn finger 235..255 CDD:275368 7/19 (37%)
C2H2 Zn finger 263..283 CDD:275368 9/20 (45%)
C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 319..339 CDD:275368
C2H2 Zn finger 347..367 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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