DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and LOC110437722

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_021327009.1 Gene:LOC110437722 / 110437722 -ID:- Length:336 Species:Danio rerio


Alignment Length:268 Identity:77/268 - (28%)
Similarity:119/268 - (44%) Gaps:65/268 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 PRDMRLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHHHQQDQD 279
            |...|:.||:                       .:||.:|:|:.....:|:       ||.:.::
Zfish     4 PEPCRIKPED-----------------------TEQQIDLIEENVASKEEE-------HHVKVEE 38

  Fly   280 LAGDQV--ALKV---PPLT-VKLNKNANGGAIVS-HPQVIIKEEPLSLSDSGDVVNSVPVYAIQA 337
            ....|.  .||.   .||| .:..|:.:..:|:: |.::..:|:|.:.::.|.....:..     
Zfish    39 KINLQTCSVLKTRDKKPLTCAQCGKSFSQSSILTPHMKIHTEEKPFTCTECGKSFRQIST----- 98

  Fly   338 NPGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPYT 402
                         :.|.|:   |..:...:|..|.|:|........|.:||||       |:|:|
Zfish    99 -------------LNTHTI---LTGEKPFRCTLCGKSFTFSSNYTKHLRIHTG-------EKPFT 140

  Fly   403 CSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFT 467
            ||.|||.|:.|::||||.|||||||||.|..|.|||..:..|.:|:..|||.||:||..|.:.|.
Zfish   141 CSQCGKRFSVSSSLKQHMRIHTGEKPFTCTQCGKSFRQRSTLCRHMEIHTGGKPFTCTQCGQSFR 205

  Fly   468 QRSALTVH 475
            |.:.|..|
Zfish   206 QMATLKGH 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 49/106 (46%)
C2H2 Zn finger 368..388 CDD:275368 5/19 (26%)
C2H2 Zn finger 403..423 CDD:275368 12/19 (63%)
C2H2 Zn finger 431..451 CDD:275368 7/19 (37%)
zf-H2C2_2 443..468 CDD:463886 11/24 (46%)
C2H2 Zn finger 459..480 CDD:275368 6/17 (35%)
LOC110437722XP_021327009.1 C2H2 Zn finger 58..78 CDD:275368 3/19 (16%)
zf-H2C2_2 74..95 CDD:463886 4/20 (20%)
C2H2 Zn finger 86..105 CDD:275368 3/39 (8%)
COG5048 <109..267 CDD:227381 51/112 (46%)
C2H2 Zn finger 113..133 CDD:275368 5/19 (26%)
C2H2 Zn finger 141..161 CDD:275368 12/19 (63%)
C2H2 Zn finger 169..189 CDD:275368 7/19 (37%)
C2H2 Zn finger 197..217 CDD:275368 6/17 (35%)
C2H2 Zn finger 225..245 CDD:275368
C2H2 Zn finger 253..273 CDD:275368
zf-H2C2_2 265..290 CDD:463886
SUF4-like 277..>329 CDD:411020
C2H2 Zn finger 281..306 CDD:411020
C2H2 Zn finger 281..301 CDD:275368
C2H2 Zn finger 309..329 CDD:411020
C2H2 Zn finger 309..329 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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