DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cf2 and si:ch211-261d7.6

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_017206987.1 Gene:si:ch211-261d7.6 / 108179605 ZFINID:ZDB-GENE-141216-266 Length:1481 Species:Danio rerio


Alignment Length:521 Identity:101/521 - (19%)
Similarity:162/521 - (31%) Gaps:180/521 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 HQVATVIANMDTLKTAFLPNLS-MDPNVHVSPHYCPMCHQQFERPQHVADHMQ---LCHGITLNA 103
            ||........|.:...|.|..: :.|.|    |:|..|.:.|........|.|   .|..:....
Zfish   744 HQKVCCGGAKDEMTKHFNPTKTLLGPKV----HHCKKCGKGFWSMGAFCHHKQNNSECADVETRP 804

  Fly   104 QGAIATLDGGHPQAQQ----------HP---KLSHPCFNCDEKFGNAVDLDEHHRLAHQTPAFLS 155
            ..|.|| :.||.:.::          ||   |:.|.|..|.:.:             |....||.
Zfish   805 ASAGAT-ENGHIRRKKRGRRGGYKKVHPMNSKVEHKCEVCGKSY-------------HMLACFLK 855

  Fly   156 RCLMCSIYGIHSATQ---------QPNEYKCTQCGSICTTAM---LAAGQQGFMEQQEAAVTPDD 208
            ..|:....|:..|.:         :.|.|:|..||.:.:.||   ......||    |..:...|
Zfish   856 HKLVHDAQGLRPAVKSFDYQVQQLKKNSYQCPDCGKVFSRAMALQFHMKSHGF----ETGLPVTD 916

  Fly   209 QLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHH 273
              |..:.|...||.......:.|..:|   |:|..:.:...:..:..|:...|:|:.:.      
Zfish   917 --PGSSERPQCLTCYSFFASESLLQDH---QKHCLKPEDNVESSQEHEKVGTEIQDASS------ 970

  Fly   274 HQQDQDLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQAN 338
             |:.:|::                                :..|.::||.               
Zfish   971 -QKSEDVS--------------------------------EMSPSAVSDK--------------- 987

  Fly   339 PGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTG------------- 390
                          .|..|:  |..:::||.||.::|...|.|..|::||..             
Zfish   988 --------------EQKAPS--ASNMKYKCKDCSRSFSVIGALNFHKRIHRKGHQSKKMKSYPVK 1036

  Fly   391 -------EADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEK--------------------P 428
                   :|:....:.|:.|:.||:.|..::.|..|.|.|..:|                    |
Zfish  1037 PLKLSKVKAEKCSAKSPFVCAECGRHFRTNSALGTHKRWHKDKKFAKYLSKTNTVRSRKSMDGGP 1101

  Fly   429 FHCGYCEKSFSVKDYLTKHIRTH--------------TGEKPYTCPYCDKRFTQRSALTVHTTKL 479
            :.|..|.|.|.....|.:|...|              ..:..||||.|...|:..|.||.|....
Zfish  1102 YLCNLCGKGFFYLCVLRRHQLHHPPMEAQPQKDNEVAESKDLYTCPDCQMSFSTGSLLTTHFADH 1166

  Fly   480 H 480
            |
Zfish  1167 H 1167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 36/160 (23%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 403..423 CDD:275368 7/19 (37%)
C2H2 Zn finger 431..451 CDD:275368 6/19 (32%)
zf-H2C2_2 443..468 CDD:316026 9/38 (24%)
C2H2 Zn finger 459..480 CDD:275368 8/20 (40%)
si:ch211-261d7.6XP_017206987.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.