DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and LOC103910897

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_068076588.1 Gene:LOC103910897 / 103910897 -ID:- Length:429 Species:Danio rerio


Alignment Length:478 Identity:107/478 - (22%)
Similarity:167/478 - (34%) Gaps:202/478 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 IANMDTLKTAFLPNLSMDPNVHV--SPHYCPMCHQQFERPQHVADHMQLCHGITLNAQGAIATLD 111
            :|:...|||..        .:|.  .|..|..|.:.|.:...:..||::..|             
Zfish    75 LASKSKLKTHM--------RIHTGEKPFTCTQCGKSFSKSSSLYRHMKIHTG------------- 118

  Fly   112 GGHPQAQQHPKLSHPCFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMC--------SIY---GI 165
                   :.|   ..|.:|.:.|.::..|:.|.|: |.....|: |..|        |:|   .|
Zfish   119 -------EKP---FTCTHCGKSFNHSSFLNLHMRI-HTGEKPLT-CPQCGKSFSKSSSLYRHMKI 171

  Fly   166 HSATQQPNEYKCTQCGSI--CTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQ 228
            |:. ::|  :.|||||..  |::::                                        
Zfish   172 HTG-EKP--FTCTQCGKSFNCSSSL---------------------------------------- 193

  Fly   229 QQLQAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHHHQQDQDLAGDQVALKVPPLT 293
                  :.|.:.|..::                                             |.|
Zfish   194 ------NKHMRIHTGEK---------------------------------------------PFT 207

  Fly   294 -VKLNKN-ANGGAIVSHPQVIIKEEPLSLSDSG-DVVNSVPVYAIQANPGVPAPASSGVLVGTQT 355
             .:..|: ::..::..|.::...|:|.:....| ..:||             :..:..:::.|..
Zfish   208 CTQCGKSFSHSSSLNQHMRIHTGEKPFTCPQCGKSFINS-------------SHLNQHIMIHTGE 259

  Fly   356 VPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHT 420
            .|        ..|..|.|:|....:|..|.:||||       |:|:||:.|||||:||::|.||.
Zfish   260 KP--------FTCTQCGKSFNCSSSLNKHMRIHTG-------EKPFTCTQCGKSFSQSSSLNQHI 309

  Fly   421 RIHTGEKPFHCGYCEKSF--------------SVKDY--------------LTKHIRTHTGEKPY 457
            .||||:|||.|..|.|||              |||:|              |.:|.|.|||||||
Zfish   310 MIHTGKKPFTCTQCGKSFSQSSYLKNHMKIHTSVKEYVCLECEKTFITAAELKRHQRIHTGEKPY 374

  Fly   458 TCPYCDKRFTQRSALTVHTTKLH 480
            .|.:|.|||||...|..| .::|
Zfish   375 KCSHCSKRFTQLGTLKTH-ERIH 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 57/134 (43%)
C2H2 Zn finger 368..388 CDD:275368 6/19 (32%)
C2H2 Zn finger 403..423 CDD:275368 11/19 (58%)
C2H2 Zn finger 431..451 CDD:275368 12/47 (26%)
zf-H2C2_2 443..468 CDD:463886 16/38 (42%)
C2H2 Zn finger 459..480 CDD:275368 9/20 (45%)
LOC103910897XP_068076588.1 C2H2 Zn finger 68..88 CDD:275368 4/20 (20%)
zf-H2C2_2 81..105 CDD:463886 8/31 (26%)
C2H2 Zn finger 96..116 CDD:275368 5/19 (26%)
zf-H2C2_2 108..133 CDD:463886 7/47 (15%)
C2H2 Zn finger 124..144 CDD:275368 6/20 (30%)
COG5048 127..>428 CDD:227381 93/395 (24%)
C2H2 Zn finger 152..172 CDD:275368 4/19 (21%)
C2H2 Zn finger 180..200 CDD:275368 7/65 (11%)
C2H2 Zn finger 208..228 CDD:275368 2/19 (11%)
C2H2 Zn finger 236..256 CDD:275368 3/32 (9%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 11/19 (58%)
C2H2 Zn finger 320..340 CDD:275368 5/19 (26%)
C2H2 Zn finger 348..368 CDD:275368 3/19 (16%)
C2H2 Zn finger 376..396 CDD:275368 9/20 (45%)
C2H2 Zn finger 404..424 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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