DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and Zfp534

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_036019448.1 Gene:Zfp534 / 100503584 MGIID:3650650 Length:698 Species:Mus musculus


Alignment Length:457 Identity:122/457 - (26%)
Similarity:183/457 - (40%) Gaps:94/457 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 NLSMDPNVH--VSPHYCPMCHQQFERPQHVADHMQLCHGITLNAQGAIATLDGGHPQAQQHPKLS 124
            ||:|...:|  ..|:.|..|.:.|.....:..|.::..|                    :.|   
Mouse   291 NLTMHQRIHKGEKPYKCSECGKCFTDKTSLRIHQRIHTG--------------------EKP--- 332

  Fly   125 HPCFNCDEKFGNAVDLDEHHRL-AHQTPAFLSRCLMC----SIYGIHS---ATQQPNEYKCTQCG 181
            :.|..|.:.|.....|..|.|: ..:.|...|.|..|    |...||.   ..::|  |||::|.
Mouse   333 YKCSECGKCFTEKSSLRIHQRIHTGEKPYKCSECGKCFTEKSSLRIHQRIHTGEKP--YKCSECD 395

  Fly   182 SICTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQQQQQ 246
            . |.|      ||.::...:...|.:..... :..|...|     .|..|..   ||:.|..::.
Mouse   396 K-CFT------QQSYLSIHQRIHTGEKPYKC-SECDKCFT-----KQSNLSI---HQRIHTGEKP 444

  Fly   247 QQ--------QQQQELLEQQQREMQEQ-----------AQQQQVHHHQQDQDLAGDQVALKVPPL 292
            .:        .||..|...|:....|:           .||..:..||:..  ||::     |..
Mouse   445 YKCSECDKCFTQQSHLSIHQRIHTGEKPYKCSECDKCFTQQSYLSIHQRIH--AGEK-----PYK 502

  Fly   293 TVKLNK-NANGGAIVSHPQVIIKEEPLSLSDSGDVV---NSVPVYAIQANPGVPAPASSGVLVGT 353
            ..:.:| ....|.::.|.::..:|:|...|:.|...   :|:.::........|...|......|
Mouse   503 CSECDKCFTTKGNLIIHQRIHTREKPYKCSECGKCFTEKSSLRIHQRIHTGEKPYKCSECDKCFT 567

  Fly   354 QTVPADLAHKIR-----HKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQS 413
            :.....:..:|.     :||.:|.|.|....:|.:|::||||       ||||.||.|.|.|||.
Mouse   568 KQSKLSIHQRIHTGEKPYKCSECEKCFNEKNSLKIHQRIHTG-------ERPYKCSECDKCFTQK 625

  Fly   414 NTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVHTTK 478
            :.|..|.|||.||||:.|..|:|.|:.|..|..|.|.||.||||.|..|||.|||:|.|::| .|
Mouse   626 SYLNIHQRIHAGEKPYKCSECDKCFTTKGNLIIHQRIHTREKPYKCSECDKCFTQKSQLSIH-QK 689

  Fly   479 LH 480
            :|
Mouse   690 IH 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 53/106 (50%)
C2H2 Zn finger 368..388 CDD:275368 6/19 (32%)
C2H2 Zn finger 403..423 CDD:275368 10/19 (53%)
C2H2 Zn finger 431..451 CDD:275368 8/19 (42%)
zf-H2C2_2 443..468 CDD:463886 14/24 (58%)
C2H2 Zn finger 459..480 CDD:275368 11/20 (55%)
Zfp534XP_036019448.1 KRAB 49..89 CDD:460171
C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 255..271 CDD:275368
COG5048 263..676 CDD:227381 112/439 (26%)
C2H2 Zn finger 279..299 CDD:275368 3/7 (43%)
C2H2 Zn finger 307..327 CDD:275368 4/19 (21%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 6/26 (23%)
C2H2 Zn finger 419..439 CDD:275368 6/28 (21%)
C2H2 Zn finger 447..467 CDD:275368 4/19 (21%)
C2H2 Zn finger 475..495 CDD:275368 4/19 (21%)
C2H2 Zn finger 503..523 CDD:275368 3/19 (16%)
C2H2 Zn finger 531..551 CDD:275368 3/19 (16%)
C2H2 Zn finger 559..579 CDD:275368 2/19 (11%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..635 CDD:275368 10/19 (53%)
C2H2 Zn finger 643..663 CDD:275368 8/19 (42%)
C2H2 Zn finger 671..691 CDD:275368 11/20 (55%)
Blue background indicates that the domain is not in the aligned region.

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