Protein Alignment Cf2 and si:ch211-241b2.4

DIOPT Version :10

• Sequence 1: NP_001350854.1
• Gene: Cf2 / 33692
• FlyBaseID: FBgn0000286
• Length: 537
• Species: Drosophila melanogaster
• Sequence 2: NP_001373223.1
• Gene: si:ch211-241b2.4 / 100150909
• ZFINID: ZDB-GENE-081104-191
• Length: 294
• Species: Danio rerio
• Alignment Length: 373
• Identity: 79/373 - (21%)
• Similarity: 121/373 - (32%)
• Gaps: 150/373 - (40%)

  Fly   113 GHPQAQQHPKLSHPCFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKC 177
            |...:|.|.:...||.:|.:.|....:|:.|.:                   .||. ::|  :.|
Zfish    52 GDTSSQTHLRDEFPCTHCGKSFSCTSNLNRHKK-------------------THSG-ERP--FTC 94

  Fly   178 TQCGSICTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQ 242
            .|||            :.|..::..                                :.|.|.|
Zfish    95 VQCG------------KSFARRENF--------------------------------YRHNQSH- 114

  Fly   243 QQQQQQQQQQELLEQQQREMQ-------EQAQQQQVHHHQQDQDLAGDQVALKVPPLTVKLNKNA 300
                       :.|:....||       ..|.::.:..|..|:....:|.. |...|...|.::
Zfish   115 -----------IGEKSFACMQCGKSFVFVDALKKHMRCHSGDRPYECEQCG-KTFTLMSSLKRH- 166

  Fly   301 NGGAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANPGVPAPASSGVLVGTQTVPADLAHKIR 365
                                                            :::.|...|
Zfish   167 ------------------------------------------------MIIHTDLKP-------- 175

  Fly   366 HKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFH 430
            :.|..|.::|.....|..|:|.||   ||    ||:.|..||.:|:.::.||:|.||||||||:.
Zfish   176 YACSQCERSFSRLDCLKKHQKTHT---DA----RPHLCLQCGSAFSSADILKRHHRIHTGEKPYS 233

  Fly   431 CGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVHTTK 478
            |..|.|||:...:|.:|.|.|||.|||.|..|.:.|:....|..|..|
Zfish   234 CSECGKSFTQSGHLMQHERVHTGRKPYICSICGRSFSTARNLPAHIKK 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cf2	NP_001350854.1	COG5048	<366..>473	CDD:227381	44/106 (42%)
		C2H2 Zn finger	368..388	CDD:275368	6/19 (32%)
		C2H2 Zn finger	403..423	CDD:275368	8/19 (42%)
		C2H2 Zn finger	431..451	CDD:275368	8/19 (42%)
		zf-H2C2_2	443..468	CDD:463886	12/24 (50%)
		C2H2 Zn finger	459..480	CDD:275368	6/20 (30%)
si:ch211-241b2.4	NP_001373223.1	COG5048	<43..272	CDD:227381	76/362 (21%)
		C2H2 Zn finger	66..86	CDD:275368	5/38 (13%)
		C2H2 Zn finger	94..114	CDD:275368	7/63 (11%)
		C2H2 Zn finger	122..142	CDD:275368	3/19 (16%)
		C2H2 Zn finger	150..170	CDD:275368	4/69 (6%)
		C2H2 Zn finger	178..198	CDD:275368	6/19 (32%)
		C2H2 Zn finger	206..226	CDD:275368	8/19 (42%)
		C2H2 Zn finger	234..254	CDD:275368	8/19 (42%)
		C2H2 Zn finger	262..282	CDD:275368	6/20 (30%)