DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and znf341

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001108045.1 Gene:znf341 / 100136854 ZFINID:ZDB-GENE-080204-99 Length:796 Species:Danio rerio


Alignment Length:542 Identity:115/542 - (21%)
Similarity:203/542 - (37%) Gaps:119/542 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PRPEDQSPAPPPPPPSSATTSTAAPATPTHQVATVIANMDTLKTAFLPNLSMDPNVHVSPHYCPM 78
            |:|..|..|.|....||:.:|:..      ||.:.:..:....||.:|.|.:             
Zfish   170 PQPLPQVQATPLSQVSSSNSSSVV------QVYSALPPLTGAGTAEVPALGL------------- 215

  Fly    79 CHQQFERPQHVADHMQLCHGITLNA-----------QGAIATLDGGHPQAQQHPKLSHP------ 126
              |.|:..|.:....|...|...:|           :....|:.....:..::.|:..|      
Zfish   216 --QSFQSIQSIQVPSQCVEGQVFSAAPVYSPGKQSTKNKACTISTNLSELAEYDKVIIPKRSRVS 278

  Fly   127 -----------------CFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMC-------------- 160
                             |..|::.|....||.:|.|.......|  :|::|              
Zfish   279 KKTQDAGQAKGKAQKLKCNYCEKVFTKNFDLQQHIRSHTGEKPF--QCIVCGRAFAQKSNVKKHM 341

  Fly   161 ---SIY--GIH-SATQQPNEYKCTQCGSICTTAMLAAGQQGFMEQ-----QEAAVTPDDQLPAMA 214
               .::  |:| ||.:.|...:.....:...||.   .:|...|:     |||.|.|:|:.....
Zfish   342 QTHKVWPAGVHSSAPRMPITVRLLPLNAEQNTAQ---DEQTVSEEHDGDVQEAQVQPEDKQSNSN 403

  Fly   215 PRDMRLTPEEQHHQQQLQAE----HHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQ-QQQVHHH 274
            ..:.::...:..:|.|..::    :...:.|..|.:.:|..:.:|:...:..|:..| .:.:|.|
Zfish   404 SLNKQMILIDSSYQCQFCSDKFSSYFQLKSHMTQHKGEQVYRCVLKSCSQTFQKLDQFLEHIHTH 468

  Fly   275 QQDQDLAGDQVALKVPPLTVKLNKNANGGAIVSH---PQVIIKEEP-----LSLSDSGDVVNSVP 331
            |:.......|.: ||.|...:|..:.     .:|   ||...::|.     :..........::.
Zfish   469 QEQLTYRCHQCS-KVFPSLFELGLHQ-----YTHSFCPQQSQRKETSYYRCMKCQSKYSTQEALE 527

  Fly   332 VYAIQANPGVPAPASSGVLVGTQTVPADLA-HKI--RHKCPDCPKTFKTPGTLAMHRKIHTGEAD 393
            .:.:.|....|.|....|....:.....|: |.:  :.||..|.|.|||...|.:|.:||:|   
Zfish   528 QHLLNATHNYPCPHCQKVFPCERYFRRHLSTHGVGGKFKCQICKKFFKTEHYLKLHTQIHSG--- 589

  Fly   394 ATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGY-----CEKSFSVKDYLTKHIRTHTG 453
                |:|:.||.|..:|.:.:.:|:|..||...|.:.|.:     |.|.|:..|.|..||.:|:|
Zfish   590 ----EKPFKCSVCEATFNRKDKVKRHMLIHEPFKKYKCPFRTHVGCTKEFNRPDKLKAHILSHSG 650

  Fly   454 EKPYTCPYCDKRFTQRSALTVH 475
            .||:.|..|.|.|::|:.:..|
Zfish   651 IKPFKCQVCQKSFSRRAHMLEH 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 40/111 (36%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 403..423 CDD:275368 6/19 (32%)
C2H2 Zn finger 431..451 CDD:275368 8/24 (33%)
zf-H2C2_2 443..468 CDD:316026 11/24 (46%)
C2H2 Zn finger 459..480 CDD:275368 6/17 (35%)
znf341NP_001108045.1 COG5048 295..676 CDD:227381 92/396 (23%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
zf-H2C2_2 308..333 CDD:290200 7/26 (27%)
C2H2 Zn finger 324..344 CDD:275368 2/19 (11%)
C2H2 Zn finger 418..438 CDD:275368 2/19 (11%)
C2H2 Zn finger 446..468 CDD:275368 4/21 (19%)
C2H2 Zn finger 476..496 CDD:275368 5/25 (20%)
C2H2 Zn finger 513..535 CDD:275370 1/21 (5%)
C2H2 Zn finger 539..559 CDD:275368 3/19 (16%)
C2H2 Zn finger 567..587 CDD:275368 8/19 (42%)
zf-H2C2_2 579..604 CDD:290200 11/31 (35%)
C2H2 Zn finger 595..615 CDD:275368 6/19 (32%)
C2H2 Zn finger 623..648 CDD:275368 8/24 (33%)
zf-H2C2_2 641..665 CDD:290200 11/23 (48%)
C2H2 Zn finger 656..676 CDD:275368 6/17 (35%)
C2H2 Zn finger 684..701 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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