DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cf2 and zbtb18

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001410839.1 Gene:zbtb18 / 100003157 ZFINID:ZDB-GENE-050419-73 Length:546 Species:Danio rerio


Alignment Length:345 Identity:84/345 - (24%)
Similarity:127/345 - (36%) Gaps:78/345 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 RLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQGFMEQQEAAVTPDDQ 209
            |::..|...|...:..|:.|........|.|.|                        ::||||..
Zfish   238 RVSADTDCVLDLSVKSSLGGGPGENIAGNPYFC------------------------SSVTPDSL 278

  Fly   210 LPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHHH 274
            ..|:.  .:::..:......:|.:..:..:....::........|....||.:..:|...     
Zfish   279 QSALV--QVKVEKDTGSDDDELVSGDYEMEHSGVKEPPSTNGTHLSLVAQRRLGLEAHLS----- 336

  Fly   275 QQDQDLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANP 339
                       ||:...|..:|.::..||                 .|..||:.. ....:|...
Zfish   337 -----------ALREASLASELERDDKGG-----------------DDDTDVLGG-DSDRVQEAA 372

  Fly   340 GVPA---PASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPY 401
            ||.:   |..|.:|        ...|.....||.|.|.|.:|..|.:|...|..|.:.. :.:|.
Zfish   373 GVESSLLPYVSSML--------GAPHTQIFMCPLCNKVFPSPHILQIHLSTHFREQEGV-RAKPA 428

  Fly   402 ------TCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCP 460
                  |||.|||:|:...|||:|.|.|:||||:.|..|.|||.....|::|...||.|||:.|.
Zfish   429 GDVNVPTCSICGKTFSCMYTLKRHERTHSGEKPYTCTTCGKSFQYSHNLSRHAVVHTREKPHACK 493

  Fly   461 YCDKRFTQRSALTVHTTKLH 480
            :|::||||...|..|..|.|
Zfish   494 WCERRFTQSGDLYRHIRKFH 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 46/112 (41%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 403..423 CDD:275368 11/19 (58%)
C2H2 Zn finger 431..451 CDD:275368 7/19 (37%)
zf-H2C2_2 443..468 CDD:463886 11/24 (46%)
C2H2 Zn finger 459..480 CDD:275368 9/20 (45%)
zbtb18NP_001410839.1 BTB_POZ_ZBTB18_RP58 10..156 CDD:349633
C2H2 Zn finger 396..416 CDD:275368 8/19 (42%)
COG5048 <397..>505 CDD:227381 45/108 (42%)
C2H2 Zn finger 436..456 CDD:275368 11/19 (58%)
zf-H2C2_2 449..471 CDD:463886 12/21 (57%)
C2H2 Zn finger 464..484 CDD:275368 7/19 (37%)
C2H2 Zn finger 492..510 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.