DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment smog and Gpr158

DIOPT Version :9

Sequence 1:NP_001245881.1 Gene:smog / 33690 FlyBaseID:FBgn0051660 Length:951 Species:Drosophila melanogaster
Sequence 2:NP_001163797.1 Gene:Gpr158 / 291352 RGDID:1305841 Length:1206 Species:Rattus norvegicus


Alignment Length:905 Identity:232/905 - (25%)
Similarity:361/905 - (39%) Gaps:189/905 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 YSLLVLLI---VGLATATAS--PS-------------------------PSPSHAPFGRESRRDA 162
            ||||:.|:   :||....||  ||                         |.|| .|:.| |....
  Rat     6 YSLLLCLLLAHLGLGEVGASLDPSERPDSSRERTSRGKQHGQQLPRASAPDPS-IPWSR-STDGT 68

  Fly   163 LLAYYKRAHLPQSSSSGISLGHKYHLLHDANGLDFDELTPTASSVSALSRAERFRLRKRSATPTT 227
            :||......:|...:|.:..| .:|.|..||               ...|.|...|..:|     
  Rat    69 ILAQKLAEEVPMDVASYLYTG-DFHQLKRAN---------------CSGRYELAGLPGKS----- 112

  Fly   228 PATAAGVTSLDVA-TAAAAATDAAAKDAGSGKKPEEKCEPK-------VLETLPDEPFYDYTDIA 284
            |:.|:...||..| .....||:.......|.|..|:..:..       |...|..||        
  Rat   113 PSLASSHPSLHGALDTLTHATNFLNMMLQSNKSREQTVQDDLQWYQALVRSLLEGEP-------- 169

  Fly   285 EDAARQFIEFLSGKFPNANTPIAIDEPTRAEVSRRANGIASYALNEDDNLLAFAIAAPSIHTVVV 349
             ..:|..|.|.:   .:.:||              |..:...|..|:..:|...:::.:.|..  
  Rat   170 -SISRAAITFST---ESLSTP--------------APQVFLQATREESRILLQDLSSSAHHLA-- 214

  Fly   350 KFRDNVTIPPDQVHNKAYLGSYWRE-------------LGAAWNSTDGT------QEWGAPFRDC 395
                |.|:..:..|.   |...||.             ||.:|...||.      .:|..||.:|
  Rat   215 ----NATLETEWFHG---LRRKWRPHLHRRGSNQGPRGLGHSWRRRDGLGGDRSHVKWSPPFLEC 272

  Fly   396 NLLTRR--WLWPFRISF--------SEHR-IKVVAAAFIAADEDVC-NDGLEEVFGRRHGCDRNT 448
            ...:.:  ||.....:|        .|.| :..|.......|.|.| :||.   |...|.|..|.
  Rat   273 ENGSYKPGWLVTLSAAFYGLQPNLVPEFRGVMKVDINLQKVDIDQCSSDGW---FSGTHKCHLNN 334

  Fly   449 TFCLLTENKPAATRDVYTCLCRESYYLP------NSTLQG----FRGDRVELSEGYDNYSCIPCP 503
            :.|:..:.. ......|.|:|:..:|.|      |...:|    |.|...::||  :.:.|:||.
  Rat   335 SECMPIKGL-GFVLGAYQCVCKAGFYHPRVFSVNNFQRRGPDHHFSGSTKDVSE--EAHVCLPCR 396

  Fly   504 GGCTNCDSNGVCLTFQEEEVLNVDACLRLLVAIVLGACILCCIVLGVIVFRQRKCKAI-ASGMWT 567
            .||..|..:..|  |.:|     |..|||.:......|:|...|..::|:..||.|:| |||: .
  Rat   397 EGCPFCADDRPC--FVQE-----DKYLRLAIISFQALCMLLDFVSMLVVYHFRKAKSIRASGL-I 453

  Fly   568 VLETILLGIVLLYASVAVHFFPASTERCLLEPWLRELGFITCYGAIILKLYRHLVDFRTRKAHRW 632
            :|||||.|.:|||..|.:.:|..||.||:|..|:|.|||.|.||.:.|||:|.|..|.:|.|.|.
  Rat   454 LLETILFGSLLLYFPVVILYFEPSTFRCILLRWVRLLGFATVYGTVTLKLHRVLKVFLSRTAQRI 518

  Fly   633 -VLRDVDLLKYLGTMVFAVICYMAAFTAS-----SLDLLESAQLESLREADTNTCHPLKWELVTQ 691
             .:....:::.|..:|..|..::..:|:|     ..|:|...|.::......|.|...:|:.:|.
  Rat   519 PYMTGGRVMRMLAVIVLVVFWFLVGWTSSMCQNLERDILLVGQGQTSDNLTFNMCLIDRWDYMTA 583

  Fly   692 TSEMLILCFGLHLSIASRNANTQFRERQFLVTALTLEFLVSSSFYFLRFVYLPEMSPSAILLALF 756
            .:|.|.|.:|::|..|.|...:.|.|.:::..|:..|.::::.|:.:|||....:.|..:|:..|
  Rat   584 VAEFLFLLWGIYLCYAVRTVPSAFHEPRYMAVAVHNELIITAIFHTIRFVLASRLQPDWMLMLYF 648

  Fly   757 IRSQLTNSFALGLIFVPKLWYQHKQVRSLAYDLSIRLPVDAFKGTSHDAGQRLGGGYAGLCLGDP 821
            ..:.||.:..:||:.:||..:.....|.   |::    .:|::       ..|..|.:|..|...
  Rat   649 AHTHLTVTVTIGLLLIPKFSHSSNNPRD---DIA----TEAYE-------DELDMGRSGSYLNSS 699

  Fly   822 DIGELTISEMSPEDIRAELKRLYTQLEIMKNKTLRQDNPHISKRRGGRKAGHRRF---------S 877
            .....:...:.|||||.|||:||.||||.|.|.:..:|||:.|:|..:|...|..         :
  Rat   700 INSAWSEHSLDPEDIRDELKKLYAQLEIYKRKKMITNNPHLQKKRCSKKGLGRSIMRRITEIPET 764

  Fly   878 LQKKGSKDKALSAKHRSNKHHQDIEITEAEPS----RTPEDS----VCSAEGPTDTYAEI 929
            :.::.||:......|.:.|....:.....|.|    |..|:|    |.|.:....||..:
  Rat   765 VSRQCSKEDKEGTDHSAAKGTGLVRKNPTESSGNTGRPKEESLKNRVFSLKKSHSTYDHV 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smogNP_001245881.1 7tm_3 542..776 CDD:278433 79/240 (33%)
Gpr158NP_001163797.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..62 7/37 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..253 3/18 (17%)
7tmC_GPR158-like 415..672 CDD:320420 83/257 (32%)
TM helix 1 416..440 CDD:320420 7/23 (30%)
TM helix 2 452..473 CDD:320420 10/21 (48%)
TM helix 3 482..504 CDD:320420 11/21 (52%)
TM helix 4 528..544 CDD:320420 3/15 (20%)
TM helix 5 575..598 CDD:320420 7/22 (32%)
TM helix 6 610..632 CDD:320420 3/21 (14%)
TM helix 7 641..666 CDD:320420 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 757..899 13/68 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1136..1166
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103956
Panther 1 1.100 - - O PTHR32546
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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