DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment smog and Gpr179

DIOPT Version :9

Sequence 1:NP_001245881.1 Gene:smog / 33690 FlyBaseID:FBgn0051660 Length:951 Species:Drosophila melanogaster
Sequence 2:XP_008766419.1 Gene:Gpr179 / 287657 RGDID:1560033 Length:2309 Species:Rattus norvegicus


Alignment Length:894 Identity:236/894 - (26%)
Similarity:340/894 - (38%) Gaps:216/894 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 VGLATATASPSPSPSHA----------PFGRESRRDALLAYYKRAHLPQSSSSGISLGHKYHLLH 190
            :|....:.|..|.||.|          |.|.|    |.||:.....:.|  .||.:...||. :.
  Rat    26 LGSQRPSRSLPPRPSQAKPGFGPTWMPPKGAE----AALAFLYSGDVQQ--LSGANCSGKYE-VR 83

  Fly   191 DANGLDFDELTPTASSVSALSRAERFRLRKRSATPTTPATAAGVTSL-----DVATAAAAAT--- 247
            .|.|        .|.....|.||           ..|.|.||...::     |:..|:....   
  Rat    84 GAEG--------KAGVPPVLQRA-----------AGTLAQAANFLNMLLQANDIREASVEEDVEW 129

  Fly   248 -DAAAKDAGSGKKPEEKCEPK---VLETLPDEPFYDYTDIAEDAARQ----FIEFLSG-KFPNAN 303
             .|..:....|       :||   .|.|....|...:..:|..|.|.    .::.||| |....|
  Rat   130 YQALVRSVAEG-------DPKAYRALLTFNPPPGASHLQLALQATRMGDETILQDLSGNKVQEEN 187

  Fly   304 TPIAIDEPTRAEVSRRANGIASYALNEDDNLLAFAIAAPSIHTVVVKFRDNVTIPPDQVHNKAYL 368
            ....:|.|          |:....|..|                 ::..|:    |.......|:
  Rat   188 PEEDLDSP----------GLQKRVLTND-----------------LRSLDS----PKWPRGDGYV 221

  Fly   369 GSYWRELGAAWNSTDGTQEWGAPFRDCNLLTRRWLWPFRISFSEHRIKVVAAAFI---------- 423
            |...:            .:...||.:|:....|..|...:|.:.:.:|......:          
  Rat   222 GDIQQ------------VKLSPPFLECHEGRLRPGWLVTVSATFYGLKPDLTPEVRGQVQMDIDL 274

  Fly   424 -AADEDVCNDGLEEVFGRRHGCDRNTTFCLLTENKPAATRDVYTCLCRESYY-------LPNSTL 480
             :.|.:.|..| ...:...|.||.|:|.|:..|.: ......|.|.||..::       |..|..
  Rat   275 QSVDINQCASG-PGWYSNTHLCDLNSTQCVPLEGQ-GFVLGRYLCRCRPGFHGAGGSGGLEESAT 337

  Fly   481 Q---GFRGDRVELSEGYDNYSCIPCPGGCTNCDSNGVCLTFQEEEVLNVDACLRLLVAIVLGACI 542
            |   .|...:..|.:   ...|.|||.|||:|.....||.   ||.       |.|...|| ||.
  Rat   338 QTAGQFGSPQGSLGK---LLGCQPCPEGCTSCLDATPCLV---EEA-------RALRTAVL-ACQ 388

  Fly   543 LCC---IVLGVIV-FRQRKCKAI-ASGMWTVLETILLGIVLLYASVAVHFFPASTERCLLEPWLR 602
            .||   :.|.::| :|.|..|.| |||: .:|||||.|.:|||..|.:.:|..|..||:...|:|
  Rat   389 ACCMLAVFLSMLVAYRCRGSKRIRASGI-VLLETILFGSLLLYFPVFILYFKPSVFRCVALRWVR 452

  Fly   603 ELGFITCYGAIILKLYRHLVDFRTRKAHRWV-LRDVDLLKYLGTMVFAVICYMAAFTASSLDL-L 665
            .|||...||.|||||||.|..|.:|.|.|.. .....||:.||.::..|:.::..:||..|:. :
  Rat   453 LLGFAVVYGTIILKLYRVLQLFLSRTAQRGPHPSSGQLLQRLGQLLLLVLGFLVVWTAGVLEPGI 517

  Fly   666 ESAQLESLREADTN----TCHPLKWELVTQTSEMLILCFGLHLSIASRNANTQFRERQFLVTALT 726
            :...|.:.....|.    .||...|:.:...:|||:||:|..|..|:|...:.|.|.:::..||.
  Rat   518 QHTPLVTRGHTPTGRHFYLCHHDHWDYIMVVAEMLLLCWGSFLCYATRAVPSAFHEPRYMSIALH 582

  Fly   727 LEFLVSSSFYFLRFVYLPEMSPSAILLALFIRSQLTNSFALGLIFVPKLWYQHKQVRSLAYDLSI 791
            .|.|:|::|:..|||.:|.:.|...||..|:.:..|.:..|.|||:||.|......|....|   
  Rat   583 NELLLSTAFHTARFVLVPSLHPDWTLLLFFLHTHSTVTTTLALIFIPKFWKPGAPPREEILD--- 644

  Fly   792 RLPVDAFKGTSHDAGQRLGGGYAGLCLGDPDIGELTISEMS--PEDIRAELKRLYTQLEIMKNKT 854
              .|...:...|.:|..|....|.           ..||.|  |.|||.|||:||.|||:.|.|.
  Rat   645 --EVYEDEPDLHRSGSYLNSSIAS-----------AWSERSLDPGDIRDELKKLYAQLEVRKTKE 696

  Fly   855 LRQDNPHISKRRGGRKAG-HRRF---------SLQKKGSKDK----------------------- 886
            :..:|||:.|:||..:.| .|.|         :|.::.|:|.                       
  Rat   697 MAANNPHLPKKRGSSRQGLGRSFMRYLAEFPEALARQHSRDSGSLGLSSLPGSSRRRLLSSSLQG 761

  Fly   887 -----ALSAKHRSNKHHQDIEITEAEPS--RT------PEDSVCSAEGP 922
                 ||.....:.:||::.....:|.|  ||      |.:...|.|||
  Rat   762 TEKAPALRKTRSTYEHHREHNTPPSESSLRRTLSKKASPTEGQVSVEGP 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smogNP_001245881.1 7tm_3 542..776 CDD:278433 89/244 (36%)
Gpr179XP_008766419.1 7tm_3 392..632 CDD:278433 87/240 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103956
Panther 1 1.100 - - O PTHR32546
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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