DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment smog and gpr179

DIOPT Version :9

Sequence 1:NP_001245881.1 Gene:smog / 33690 FlyBaseID:FBgn0051660 Length:951 Species:Drosophila melanogaster
Sequence 2:XP_031750226.1 Gene:gpr179 / 100496332 XenbaseID:XB-GENE-994077 Length:1546 Species:Xenopus tropicalis


Alignment Length:1025 Identity:235/1025 - (22%)
Similarity:391/1025 - (38%) Gaps:302/1025 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 TNSATAASAAAATLSESTRCNIIISS-SSSSSSSTKSSKNIREPSSSSSTQLNTLYSLLVLLIVG 137
            |..:|.:....:|...|...::.:|: :.::|||.:|:.::....|:|||              .
 Frog    40 TPLSTTSPGLPSTSFPSAVSSLAVSAPADTASSSPESTSSLPFSPSTSST--------------S 90

  Fly   138 LATATASPSPSPSHAPFGRESRRDALLAYYKRAHLPQSSSSGISLGHKYHLLHDANGLDFDELT- 201
            .:..|.:|||....|  ..|..:.||...:...||               ||.:||.....||| 
 Frog    91 FSVTTLAPSPDVDKA--DEEGSKAALNFLHSGDHL---------------LLSEANCSKSFELTD 138

  Fly   202 ----PTASSVS-------ALSRAERFRLRKRSATPTTPATAAGVTSLDVATAAAAATDAAAKDAG 255
                |..:.:|       :|..|..|                    |::...|:...:::.|:  
 Frog   139 LQGPPPETLLSHIRGPQDSLLHATNF--------------------LNMIFQASDMRESSIKE-- 181

  Fly   256 SGKKPEEKCEPKVLETLPDEPFYDYTDIAEDAARQFIEFLSGKFPNANTPIAIDEPTRAEVSRRA 320
                              |..:|          ...:..|:|..||..         ||.:|..|
 Frog   182 ------------------DMEWY----------HALVRSLAGGQPNIR---------RALLSLTA 209

  Fly   321 NGIASYALNEDDNLLAFAIAAPSIHTVVVKFRDNVTIPPDQVH--NKAYLGSYWRELGAA----- 378
            :.::|       ..|....|....|.::::     .:..|..|  :|...|| |....|:     
 Frog   210 HPMSS-------KPLLLLRATKKGHEILLQ-----DLSSDFYHGRHKGNWGS-WDNFHASSSLTK 261

  Fly   379 --------------WNSTD------GTQEWGAPFRDCNLLTRRWL--WPFRISFSEHRIKV-VAA 420
                          |:..|      ....|..||.:|.  ...:|  |...:|.:.:.:|. ::.
 Frog   262 AILLNDLRSLDTPKWSRGDSYIVDLSHVRWSKPFLECE--GGHFLQGWMISLSTAFYGLKPDLSP 324

  Fly   421 AF---IAADEDVCNDGLEEV------FGRRHGCDRNTTFCLLTENKPAATRDVYTCLCRESYYLP 476
            .|   :..|..:.|.|:::.      |...|.||.|:|.| :::.|..:....|.|:|:..||..
 Frog   325 EFKGTLRVDVQLLNLGIDQCAKGPGWFANSHSCDENSTQC-ISDEKDGSILGRYRCVCQPGYYRT 388

  Fly   477 NSTLQGFRGDRVELSEGYDNYSCIPCPGGCTNCDSNGVCLTFQEEEVLNVDACLRLLVAIVLGAC 541
                   |.:..|:|    |.:|.||..||..|.....||       ::.|..||:.|..|....
 Frog   389 -------RHEGSEIS----NVACRPCSEGCATCVDGSPCL-------VDEDWALRVTVLSVQATG 435

  Fly   542 ILCCIVLGVIVFRQRKCKAI-ASGMWTVLETILLGIVLLYASVAVHFFPASTERCLLEPWLRELG 605
            :|...:..::.:..|..|.| |||: .:|||||.|.:|||..|.:.:|..|..||:...|:|.||
 Frog   436 MLAVFLSMLVSYSFRDSKRIRASGL-ILLETILFGSLLLYFPVFILYFKPSVFRCVALRWVRLLG 499

  Fly   606 FITCYGAIILKLYRHLVDFRTRKAHRW-VLRDVDLLKYLGTMVFAVIC--YMAAFTASSLDLLES 667
            |...||.|:|||||.:..|.:|.|.|. .|..:.||:.|  .||.:.|  ::..:|..:|:.|:.
 Frog   500 FCIVYGTIVLKLYRVMKVFLSRTAQRVPYLTSMRLLRML--FVFLLFCIWFLVGWTVGALENLQR 562

  Fly   668 AQLESLREADTN-----TCHPLKWELVTQTSEMLILCFGLHLSIASRNANTQFRERQFLVTALTL 727
            .....:|.....     ||...:|:.:...:|:|.||:|..|...:|:..:.|.|.:::..|:..
 Frog   563 GVPVVIRTQTREGLVFYTCDHDRWDYMMSIAEVLFLCWGSFLCYGARSIPSAFHEPRYMGIAIHN 627

  Fly   728 EFLVSSSFYFLRFVYLPEMSPSAILLALFIRSQLTNSFALGLIFVPKLWY----QHKQVRSLAYD 788
            |.:||::|:.|||:.:|.:.|...||..||.:..|.:..|.|:|:||..:    ..:::.:..|:
 Frog   628 EMIVSAAFHVLRFLIVPSLHPDWTLLLFFIHTHGTVTMTLTLLFIPKFLHAGVPPREEIATEVYE 692

  Fly   789 LSIRLPVDAFKGTSHDAGQRLGGGYAGLCLGDPDIGELTISEMSPEDIRAELKRLYTQLEIMKNK 853
            ..:    |..:..|:              |........:...:.|:|||.|||:||.|||:.|.|
 Frog   693 DEL----DMRRSRSN--------------LNSSITSAWSEHSLDPDDIRDELKKLYAQLEVHKTK 739

  Fly   854 TLRQDNPHISKRRGGRK--------------------------------AGHRRFSLQKKGS--- 883
            .:..:|||:.|:|..|:                                :|.:|...|..||   
 Frog   740 KMTINNPHLQKKRSSRRGLGRSIMRRITETPDSANRQSTREDKEGSPGSSGGQRRKQQDSGSVKQ 804

  Fly   884 -----KDKALSAK--HRSNKHHQDI---------EITEAEPS----------------RTPEDSV 916
                 :.:.||.:  |.:..|.|:.         |.:..:||                |:..||:
 Frog   805 REESLRQRVLSLRKSHSTYDHMQECKDAGPPSPRESSTRDPSLRDSVMRRNLARNVSMRSRGDSL 869

  Fly   917 CSAEGPTDTYAEISGVSHSMLSHSMV---------------SHSVVSHSK 951
            |.|  |.        |..|:.:|:::               ||||:...|
 Frog   870 CHA--PL--------VCKSLSAHNLLADKKPLSVRPGPLQKSHSVMGSGK 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smogNP_001245881.1 7tm_3 542..776 CDD:278433 81/242 (33%)
gpr179XP_031750226.1 TM helix 4 536..552 CDD:320420 4/17 (24%)
TM helix 5 583..606 CDD:320420 7/22 (32%)
TM helix 6 618..640 CDD:320420 6/21 (29%)
TM helix 7 649..674 CDD:320420 8/24 (33%)
PTZ00214 <368..>415 CDD:173479 16/57 (28%)
7tmC_GPR158-like 423..679 CDD:320420 85/258 (33%)
TM helix 1 424..448 CDD:320420 5/23 (22%)
TM helix 2 460..481 CDD:320420 10/21 (48%)
TM helix 3 490..512 CDD:320420 10/21 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR32546
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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