DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12194 and ARN1

DIOPT Version :10

Sequence 1:NP_001162873.1 Gene:CG12194 / 33685 FlyBaseID:FBgn0031636 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_011823.1 Gene:ARN1 / 856345 SGDID:S000001032 Length:627 Species:Saccharomyces cerevisiae


Alignment Length:622 Identity:104/622 - (16%)
Similarity:203/622 - (32%) Gaps:198/622 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 REERKPIV--------------SSSSSSTCSSSDDEVHPVVRRRS--TRDTELAGHQKDAGCCDP 51
            :||:|.:.              |:|.|.......::.:.:.:.||  .:.||:.|          
Yeast    11 KEEKKHVFMGMEHELNPETHNDSNSDSYGLPQLSEKYNALRQNRSLIIQQTEIIG---------- 65

  Fly    52 TSTPHRF----LALLFMCLLGFGSYFCYDNPGALQDVFQKELQLSSTEFTLIYSIYSWPNIVLCF 112
             |..:::    :.||...:.|:|    |...|.::.::......|.:|.:|:.:|          
Yeast    66 -SAYNKWYLQAILLLSAFICGYG----YGLDGNIRYIYTGYATSSYSEHSLLSTI---------- 115

  Fly   113 VGGFLIDRVFGIRLGTIIYMLIVLVGQLIFA-TGGVLGHFWLMIVGRFVFGIGA--ESLAVAQNS 174
                           .:|..::....|:|:| ...|.|..:|.|....::.:|.  :|.|.....
Yeast   116 ---------------NVINAVVSAASQIIYARLSDVFGRLYLFISAVILYVVGTIIQSQAYDVQR 165

  Fly   175 YA--VLWFKGKEINMVFGLQLSVARFGS---------------TVNFWIMQPLYGYVSKSYSGYK 222
            ||  .:::....:.::..|.:.::.|.|               .:|.||...:....:...:...
Yeast   166 YAAGAIFYNAGYVGVILILLIILSDFSSLKWRLLYQFVPTWPFIINTWIAGNITSRANPVVNWSW 230

  Fly   223 GLGVALFLASSTCVMSLVCTLILGWMDKRAE--RILKRNNNPGGELAKLSD---IVTFKLDFWMV 282
            .:|:..|:...:||..::|.|.:.|..::..  ..||      |:.:...:   |...|..|||:
Yeast   231 DVGMWAFIFPLSCVPIVLCMLHMQWRARKTPEWHALK------GQKSYYQEHGFIKILKQLFWML 289

  Fly   283 SVV----------CVAYYVA--------------IFPFV-------------------------- 297
            .||          |:...:.              |.|||                          
Yeast   290 DVVGVLLMGCSLGCILVPLTLAGGVKTTWNDSRLIGPFVLGFVLIPILWIWEYRFARDPILPYRL 354

  Fly   298 --------ALGQAFFVS-NFHMTPD---------------EANTVNSIVYLISAIASPLFGFVID 338
                    ::|.:|.:. .::|..|               .|..:.::...:|.:|||.|..::.
Yeast   355 VKDRAVWSSMGISFLIDFIYYMAADYLYTVMIVAVNESVKSATRIATLSSFVSTVASPFFALLVT 419

  Fly   339 KVGRNVTWVF--CA---TISTLLAHFLLTFTHLDPYIG-MSIMGLSYSMLAASLWPLVSLIVPEY 397
            :..|...::.  ||   ....||.||..........|| :.:.|:..::....:...|...|...
Yeast   420 RCTRLKPFIMFGCALWMVAMGLLYHFRGGSQSHSGIIGALCVWGVGTTLFTYPVTVSVQSAVSHE 484

  Fly   398 QLGTAYGFCQSVQNLGLAVVTIAAGIIVDSSGGSHFWLQVFFMSFLLVSLLATCAIWAYNRKHQG 462
            .:.|......::..:|.||.:..:|.|         |.|..:...|               |..|
Yeast   485 NMATVTALNYTLYRIGSAVGSAVSGAI---------WTQTLYKQIL---------------KRMG 525

  Fly   463 NLNMSPAQRATYHTSIAMQCRHMNRRPLLGN---YVQ 496
            ::.::.....:.:|.|........:|..|.|   |||
Yeast   526 DVALATTAYESPYTFIETYTWGTPQRNALMNAYKYVQ 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12194NP_001162873.1 MFS_MFSD1 61..456 CDD:340898 82/499 (16%)
ARN1NP_011823.1 MFS_ARN_like 74..586 CDD:340880 92/548 (17%)

Return to query results.
Submit another query.