DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12194 and VBA3

DIOPT Version :9

Sequence 1:NP_001162873.1 Gene:CG12194 / 33685 FlyBaseID:FBgn0031636 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_009864.1 Gene:VBA3 / 850290 SGDID:S000000574 Length:458 Species:Saccharomyces cerevisiae


Alignment Length:467 Identity:102/467 - (21%)
Similarity:154/467 - (32%) Gaps:182/467 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 LCFVGGFLI----DRVFGIRLGTIIYMLIVLVGQLIFATGGVLGHFWLMIVGRFVFGIGAESLAV 170
            ||||.|..:    .|...|.:.:..:.:..:||.:|   ||.   |...:..|:.|.|   :|.:
Yeast    21 LCFVIGCTMVGERSRPLVISILSCAFAVAAIVGPII---GGA---FTTHVTWRWCFYI---NLPI 76

  Fly   171 AQNSYAVLWF--------KG--KEINMVFGL--QLSVARFGSTVNF-WIMQPL------------ 210
              ...|::.|        ||  ::|....|.  ..:.::|...||| .:|..:            
Yeast    77 --GGLAIIMFLLTYKAENKGILQQIKDAIGTISSFTFSKFRHQVNFKRLMNGIIFKFDFFGFALC 139

  Fly   211 -----------------YGYVSKSYSGYKGLGVALFLASSTCVMSLVCTLILGWMDKRAERILKR 258
                             |.:.|.....|..|||.||      :.|||....|  .||        
Yeast   140 SAGLVLFLLGLTFGGNKYSWNSGQVIAYLVLGVLLF------IFSLVYDFFL--FDK-------- 188

  Fly   259 NNNPGGE------------LAK----LSDIVTFKLDFWMVSVVCVAYYVAIFPFVALGQAFFVSN 307
             .||..:            :||    :.::|||        ::|..|...:...|...|..|.|:
Yeast   189 -FNPEPDNISYRPLLLRRLVAKPAIIIINMVTF--------LLCTGYNGQMIYSVQFFQLIFASS 244

  Fly   308 -----FHMTPDEANTVNSIVYLISAIAS-----------PL--FGFVIDKVGRNVTWVF--CATI 352
                 .|:.|      ..|..:|:||||           ||  ||.|:..:|..:..:.  .:|.
Yeast   245 AWKAGLHLIP------IVITNVIAAIASGVITKKLGLVKPLLIFGGVLGVIGAGLMTLMTNTSTK 303

  Fly   353 STLLAHFLLTFTHLDPYIGMSI-MGLSYSMLAASLWPLVSLIVPE---------------YQLGT 401
            ||.:...||.        |.|: ..|..|:::|.|  .::...||               ..|||
Yeast   304 STQIGVLLLP--------GFSLGFALQASLMSAQL--QITKDRPEAAMDFIEVTAFNTFMKSLGT 358

  Fly   402 AYG-------FCQSVQN-LGLAVVTIAAGIIVD--------SSGGSH--------------FWLQ 436
            ..|       |..|..| :..|.:....|..||        :..|||              ||:.
Yeast   359 TLGGVLSTTVFSASFHNKVSRAHLEPYEGKTVDDMILYRLQNYDGSHSTIGNILSDSIKNVFWMD 423

  Fly   437 VFF--MSFLLVS 446
            :.|  :.||..|
Yeast   424 LGFYALGFLFCS 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12194NP_001162873.1 MFS 61..454 CDD:119392 102/467 (22%)
MFS_1 64..416 CDD:284993 89/411 (22%)
VBA3NP_009864.1 MFS <1..369 CDD:421695 86/399 (22%)
MFS <1..>181 CDD:421695 38/176 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341825
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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