DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12194 and Mfsd1

DIOPT Version :10

Sequence 1:NP_001162873.1 Gene:CG12194 / 33685 FlyBaseID:FBgn0031636 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_080089.1 Gene:Mfsd1 / 66868 MGIID:1914118 Length:464 Species:Mus musculus


Alignment Length:453 Identity:239/453 - (52%)
Similarity:322/453 - (71%) Gaps:5/453 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DDEVHPVVRRRSTRDTELAGHQKD-AGCCDPTSTPHRFLALLFMCLLGFGSYFCYDNPGALQDVF 85
            |.|...::..|...|:.:.|..:. :..|||:...||.:.|..||.||||||||||||.|||...
Mouse     5 DGEDRALLGGRREADSAVHGAPRALSALCDPSRLAHRLVVLSLMCFLGFGSYFCYDNPAALQTQV 69

  Fly    86 QKELQLSSTEFTLIYSIYSWPNIVLCFVGGFLIDRVFGIRLGTIIYMLIVLVGQLIFATGGVLGH 150
            ::::|:::|:|.|:|:.|||||:||||:|||||||:||||.||:|:...|.:||:|||.||:...
Mouse    70 KRDMQVNTTKFMLLYAWYSWPNVVLCFLGGFLIDRIFGIRWGTVIFSCFVCIGQVIFALGGIFNA 134

  Fly   151 FWLMIVGRFVFGIGAESLAVAQNSYAVLWFKGKEINMVFGLQLSVARFGSTVNFWIMQPLYGYVS 215
            ||||.:||||||||.||||||||:|||.||||||:|:|||||||:||.|||||..:|..|||.:.
Mouse   135 FWLMELGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYGKIE 199

  Fly   216 K--SYSGYKGLGVALFLASSTCVMSLVCTLILGWMDKRAERILKRNNNPGGELAKLSDIVTFKLD 278
            .  ..:|:..|||.|.:...||:.||:|.|.|.::|:|||:||.:.....||:.||.||..|.|.
Mouse   200 ALLGSAGHMTLGVTLMIGCITCIFSLICALALAYLDRRAEKILHKEQGKTGEVIKLRDIKDFSLP 264

  Fly   279 FWMVSVVCVAYYVAIFPFVALGQAFFVSNFHMTPDEANTVNSIVYLISAIASPLFGFVIDKVGRN 343
            ..:|.|:||.||||:|||:.||:.||:..|..:...|:.:|||||:|||..|||||.::||.|:|
Mouse   265 LILVFVICVCYYVAVFPFIGLGKVFFMEKFRFSSQSASAINSIVYIISAPMSPLFGLLVDKTGKN 329

  Fly   344 VTWVFCATISTLLAHFLLTFTHLDPYIGMSIMGLSYSMLAASLWPLVSLIVPEYQLGTAYGFCQS 408
            :.||..|..:||::|.:|.||..:|:|.|.::|.|||:||.:|||:|:.||||:||||||||.||
Mouse   330 IIWVLYAVAATLVSHMMLAFTFWNPWIAMCLLGFSYSLLACALWPMVAFIVPEHQLGTAYGFMQS 394

  Fly   409 VQNLGLAVVTIAAGIIVDSSGGSHFWLQVFFMSFLLVSLLATCAIWAYNRKHQGNLNMSPAQR 471
            :|||||||:.|.||:|:||.|  :..|:|||::.:.:||||...::..||...||||.|..||
Mouse   395 IQNLGLAVIAILAGMILDSKG--YLLLEVFFIACVSLSLLAVVCLYLVNRAQGGNLNYSAKQR 455

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG12194NP_001162873.1 MFS_MFSD1 61..456 CDD:340898 220/396 (56%)