DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12194 and mfsd-8

DIOPT Version :9

Sequence 1:NP_001162873.1 Gene:CG12194 / 33685 FlyBaseID:FBgn0031636 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001022903.1 Gene:mfsd-8 / 190242 WormBaseID:WBGene00021814 Length:519 Species:Caenorhabditis elegans


Alignment Length:578 Identity:102/578 - (17%)
Similarity:190/578 - (32%) Gaps:180/578 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ERKPIVSSSSSSTCSSSDDEVHPVVRRRSTRDTELAGHQKDAGCCDPTSTPHRFLALLFMCLLGF 69
            |:..|.:.||:|..|....|...::..|.|....:                :...|:...|.:.|
 Worm    14 EKAKISTISSNSIDSGGKSESDIIIDNRETSWQSI----------------YLLTAIGMFCGIQF 62

  Fly    70 GSYFCYDNPGALQDVFQKELQLSSTEFTLIYSIYSWPNIVLCFVGGFLIDRVFGIRLGTIIYMLI 134
            ..:|    |.....:...:...|::.|..|.:.:|....:...|.|:.:::...:|...:..:.:
 Worm    63 SIFF----PTLWPFLNTVDPTASASFFGFITAAFSVGQGLASPVFGYWMNKAKSVRQPLVFGISV 123

  Fly   135 VLVGQLIFATGGVLG---HFWLMIVGRFVFGIGAESLAV--------------------AQNSYA 176
            :::..:||.......   ..|:|:|.||..|:||.::.|                    .|.||.
 Worm   124 MILSNIIFCFVEAFAEKERRWVMMVARFFIGVGAGTIGVMRAYAATASSLKDRARAITFIQASYV 188

  Fly   177 VLWFKGKEINMVF------GLQLSV---------ARFGSTVNFWIMQPLYGYVSKSYSG------ 220
            :....|..|.:.|      ||...|         |.|.|.::...:..::.::.::|:|      
 Worm   189 IGMTLGPGIQVAFTPIGYPGLSKGVFHVDMYTSPAWFASIISLLSVIFIFIFLEENYAGLDQGAD 253

  Fly   221 ----YKGLGVALFLASSTCVM----------------SLVCTLILGWMDKRAER---ILKRNNNP 262
                |..:.....::.:.||:                ||...::.||.:.:|..   ||:..|..
 Worm   254 TEDSYTAMPTFDTISVAVCVLTQFTLMFIITNLETIGSLYAKMMWGWTNAQAVEYTGILQAVNGL 318

  Fly   263 GGEL------AKLSDIVT---------FKLDFWMVSVVCVAYYVAIFPFVALGQAFFVSNFHMTP 312
            .|.|      .||.|.::         |.|      .:.|.|:|..:|            :...|
 Worm   319 VGVLVYALFAVKLGDYISQARERIFTIFGL------ALGVLYHVVTYP------------YPWGP 365

  Fly   313 D-EANTVNSIVYLISAIASPLFGFVIDKVGRNVT---------WVFCATISTLLAHFLLTFTHLD 367
            | :..|:|..::                 |:|.|         :.:|.  .|...:|.|      
 Worm   366 DLKYTTINVTIH-----------------GKNQTEDLGCNPAKYHWCT--YTKDVNFWL------ 405

  Fly   368 PYIGMSIMGLSYSMLAASLWPLVSL--------IVPEYQLGTAYGFCQSVQNLGLAVVTIAAGII 424
             |..|      |.::.|:.:|:|::        |:...:.||..|......:....:..:....|
 Worm   406 -YASM------YGIVLAACFPIVNICMNTLFSKILGARRQGTMQGVMLMAGSFARTIGPLLVSWI 463

  Fly   425 VDSSGGSHFWLQVFFMSFLLVSLLATCAIWA--YNRKH--QGNLNMSPAQRATYHTSI 478
            ....|....|:      ..:::|..|...|.  |.|..  ..|..::|.|...|...|
 Worm   464 FQEWGPEPIWI------IEILTLSITAIFWMIFYRRMKPLDSNPKLAPYQFFYYSKGI 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12194NP_001162873.1 MFS 61..454 CDD:119392 84/492 (17%)
MFS_1 64..416 CDD:284993 79/451 (18%)
mfsd-8NP_001022903.1 MFS_MFSD8 48..495 CDD:340884 88/522 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156831
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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