DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12194 and srsx-34

DIOPT Version :9

Sequence 1:NP_001162873.1 Gene:CG12194 / 33685 FlyBaseID:FBgn0031636 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_505341.1 Gene:srsx-34 / 179281 WormBaseID:WBGene00016093 Length:491 Species:Caenorhabditis elegans


Alignment Length:501 Identity:97/501 - (19%)
Similarity:177/501 - (35%) Gaps:150/501 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ALLFMCL-------LGFGS--YFCYDNPGALQDVFQKELQLSSTE-----FTLIYSIYSWPNIVL 110
            |.:..||       ||.|.  |....:|.|....|  .|..|:::     |.||:||:|:     
 Worm    39 AAVVSCLNAVENSVLGIGEWPYMREIDPNATAQFF--GLATSASKCGHAVFALIFSIWSY----- 96

  Fly   111 CFVGGFLIDRVFGIRLGTIIYMLIVLVGQLIFATGGVL---GHFWLMIVGRFVFGIGAESLAVAQ 172
                     :...:::..|...||.:...:|:.|...:   ..:.||.| ..:.|| |.|.....
 Worm    97 ---------KTSSVKIPLIASRLIAIAACMIYLTIEYVKTDKRYVLMAV-YTLLGI-ANSGGTVL 150

  Fly   173 NSYAVLWFKGKEINMVFGLQLSVARFGSTVNFWI-----MQPLYGYVSKSYSGYKGL-GVALFLA 231
            ..|..|....::....|      |..|.:..|.|     :|.::..:  .|.||:.: |:...|.
 Worm   151 RGYVTLCSSNEDRPRAF------AALGLSFIFSIIVGPTIQLIFSAI--PYPGYEIIPGIWFHLY 207

  Fly   232 SSTCVMSLVCTLILGWM------DKRAERILKRNNNPGGELAKLS---------DIVTFKLDFWM 281
            |:...:|.:.|::..::      |...|:  |....|....:..|         .:....|| |.
 Worm   208 SAPIWISFILTILTVFVILILIEDISREK--KTKLRPSESQSSFSMERWRSLYEKLKKSNLD-WK 269

  Fly   282 VSVVCVAYYVAIFPFVALGQAFFVSNFHMTPDEANTVNSIVYL------------ISAIASPLFG 334
            :.|||.        ||.:.    ||..|.|   .:|:.||:|:            :.:|...:||
 Worm   270 LIVVCF--------FVRMA----VSFSHST---LSTIGSILYMVMFGWDGATTVRVGSITMVIFG 319

  Fly   335 FVIDKVGRNVTWVFCATISTLLAH-------------FLLTFTH--------------------- 365
            .:...:  .:.::||.....|..|             :::|:..                     
 Worm   320 VMSSTI--LLLYIFCHFGKILPQHKVFLFFTIAFGAVYIITYPFEFTSNPVAKYNETTRAGCNPE 382

  Fly   366 ----------LDP--YIGMSIM--GLSYSMLAASLWPLVSLIVPEYQLGTAYGFCQSVQNLGLAV 416
                      ::|  |:.::|:  |:|..:::.:|..:.|.|:.......|:|....:.::...:
 Worm   383 EYSWCSTALAVNPMLYLSVTILVAGMSIPIMSTALDTVYSRILGNIDQSVAHGAMAVIDDILYMI 447

  Fly   417 VTIAAGIIVDSSGGSHFWLQVFFMSFLLVSLLATCAIWAYNRKHQG 462
            ..|....:....|....|: |..|:|.:::|     .||.|.|..|
 Worm   448 TPIFTTTMFTLYGIGPLWI-VKSMAFGIIAL-----TWAANLKKIG 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12194NP_001162873.1 MFS 61..454 CDD:119392 91/490 (19%)
MFS_1 64..416 CDD:284993 84/449 (19%)
srsx-34NP_505341.1 MFS 36..>229 CDD:304372 46/215 (21%)
SugarP_isomerase <49..>90 CDD:294243 10/42 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156838
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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