DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and GLR2.5

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001332219.1 Gene:GLR2.5 / 830991 AraportID:AT5G11210 Length:918 Species:Arabidopsis thaliana


Alignment Length:1018 Identity:202/1018 - (19%)
Similarity:371/1018 - (36%) Gaps:267/1018 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LWLLGFLSLL---SSFSLEIAAQTTQNINVLFINEVDNEPAAKAVEVVLTYLKKNIRYGLSVQLD 73
            ||||.||..|   ...|.:.|.|....| ||..|....:.:.:|:.:.|:.. .|...|...:  
plant    14 LWLLIFLVFLVLSLGKSQKEALQVKVGI-VLGSNVTLADLSLRAINMSLSEF-YNTHNGFKTR-- 74

  Fly    74 SIEANKSDAKVLLEAICNKYATSIEKKQTPHLILDTTKSGIASETVKSFTQALG----LPTISAS 134
             |..|..|:|..:..........|:|::...:|      |..:.....|...||    :|.|  |
plant    75 -IVLNVRDSKQTVVGAAASALYLIKKREVVAII------GPGTSMQAPFLINLGNQSKVPII--S 130

  Fly   135 YGQQGDLRQWRDLDEAKQKYLLQVMPPADIIPEAIRSIVIHMNITNAAILY-DDSF-------VM 191
            :.....|     ||..:..|.::.........:||.:|:..........:| |:.|       ::
plant   131 FSATSPL-----LDSLRSPYFIRATHDDSSQVQAISAIIESFRWREVVPIYVDNEFGEGILPNLV 190

  Fly   192 DHKYKSLLQNIQTRHVITAIAKDGKREREEQIEKLRNLDINNFFI-----LGT-LQSIRMVLESV 250
            | .::.:...|:.|..|:....|.:.::|  :.||..:....|.:     ||: |.||...::.:
plant   191 D-AFQEINVRIRYRSAISLHYSDDQIKKE--LYKLMTMPTRVFIVHMLPDLGSRLFSIAKEIDML 252

  Fly   251 KPAYFERNFAWHAITQNEGEISSQRDNATIMFM-------------KPMAY--TQYRDRLGLLRT 300
            ...|     .| .:|....::.|....::::.|             |.:.:  .:::.|.|    
plant   253 SKGY-----VW-IVTNGIADLMSIMGESSLVNMHGVLGVKTYFAKSKELLHLEARWQKRFG---- 307

  Fly   301 TYNLNEEPQLSSAFYFDLALRSFLTIKEMLQSGAWPKDMEYLNCDDFQGGNTPQRNLDLRDYFT- 364
                .||....:.:.:|.|....::::|          :.::|    ...||.:.:....|..| 
plant   308 ----GEELNNFACWAYDAATALAMSVEE----------IRHVN----MSFNTTKEDTSRDDIGTD 354

  Fly   365 -----------KITEPTSYGTFDLVTQSTQPFNGHSFMKFEMDINVLQIRGGSSVNSKSIGKWIS 418
                       |:.:..|..:|..|....|..||      :::....:|........:::|.|.|
plant   355 LDELGVALSGPKLLDALSTVSFKGVAGRFQLKNG------KLEATTFKIINIEESGERTVGFWKS 413

  Fly   419 --GLNSELIVKDEEQMKNLTADTVYRIFTVVQAPFIMRDET--APKGYK---------------- 463
              ||           :|:|..|.|......:: |.|...:|  .|||::                
plant   414 KVGL-----------VKSLRVDKVSHSSRRLR-PIIWPGDTIFVPKGWEFPTNAKKLRIAVPKKD 466

  Fly   464 --------------------GYCIDLINEIAA----IVHFDYTIQEVEDGKFGNMDENGQWNGIV 504
                                |:|||:.|.:.:    .|.::|...:..|||     ..|.::.:|
plant   467 GFNNFVEVTKDENTNVPTVTGFCIDVFNTVMSQMPYAVSYEYIPFDTPDGK-----PRGSYDEMV 526

  Fly   505 KKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLCI 569
            ..:...:.|..:|..:::|.|...:||.:||.:...:.::..:.......:.||..|...:||..
plant   527 YNVFLGEFDGAVGDTTILANRSHYVDFALPYSETGIVFLVPVKDGKEKGEWVFLKPLTKELWLVT 591

  Fly   570 LAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKRE----FNLKECLWFCMTSL-----TPQGG 625
            .|::.:...::|||:             |:.|||.||    ..:....:|..::|     .|.  
plant   592 AASFLYIGIMVWIFE-------------YQADEEFREQMIIDKISSVFYFSFSTLFFAHRRPS-- 641

  Fly   626 GEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQ-YKILYAPLNGS 689
                ::...|::...|.....|:..||||.|.:.|||..|...|..:|||.|. ..|.|.  .||
plant   642 ----ESFFTRVLVVVWCFVLLILTQSYTATLTSMLTVQELRPTVRHMDDLRKSGVNIGYQ--TGS 700

  Fly   690 SAMTYFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAKLPATLD 754
            ..   |||   ::||.:               :.|:|..::.|         :.|:|..|.    
plant   701 FT---FER---LKQMRF---------------DESRLKTYNSP---------EEMRELFLH---- 731

  Fly   755 EAVARVRNSTAATGFAFLGDATDIRYLQL---TNC-DLQVVGEEFSRKPYAIAVQQGSHLKDQFN 815
                  ::|......||    .::.|::|   ..| :..::...|....:..|...||.|....:
plant   732 ------KSSNGGIDAAF----DEVAYIKLFMAKYCSEYSIIEPTFKADGFGFAFPLGSPLVSDIS 786

  Fly   816 NAILTLLNKRQLEKLKEKWWKNDEALAKC------DKPEDQSDGISIQNIGGVFIVIFVGIGMAC 874
            ..||.:.....::.::.||:..::   .|      |.| .|.|..|.:   .:|:::|| :.:..
plant   787 RQILNITEGDAMKAIENKWFLGEK---HCLDSTTSDSP-IQLDHHSFE---ALFLIVFV-VSVIL 843

  Fly   875 ITLVFEYWWYRYRK---NPRIIDVAEANA------ERSNAADH 908
            :.|:.....|:.|:   :|.:.: .:|||      |..|..||
plant   844 LLLMLASRGYQERQHNASPNLPN-DQANAAQEEVNEEGNVGDH 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 74/432 (17%)
PBP2_iGluR_putative 438..836 CDD:270435 93/453 (21%)
Lig_chan 565..870 CDD:278489 71/324 (22%)
GLR2.5NP_001332219.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.910

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