DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and GLR5

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_565744.1 Gene:GLR5 / 817801 AraportID:AT2G32400 Length:921 Species:Arabidopsis thaliana


Alignment Length:958 Identity:190/958 - (19%)
Similarity:372/958 - (38%) Gaps:217/958 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NINVLF-INEVDNEPAAKAVEVVLTYLKKNIRYGLSVQLDSIEANKSDAKVLLE-AICNKYATS- 96
            ||..:| .:.|....|..|:|..::          .|..|.....:::.::|:| :.||.:..| 
plant    32 NIGAVFAFDSVIGRAAKVALEAAVS----------DVNNDKSFLKETELRLLMEDSACNVFRGSF 86

  Fly    97 -----IEKK----------QTPHLILDTTKSGIASETVKSFTQALGLPTISASY------GQQGD 140
                 :||:          ...|.|.|..| |:....| ||  |...||:||..      ....|
plant    87 GAFELLEKEVVAMIGPISSSVAHTISDIAK-GLHFPLV-SF--AATDPTLSALQFPFFLRTTPND 147

  Fly   141 LRQWRDLDEAKQKY----LLQVMPPADIIPEAIRSIVIHMNITNAAILY--------DDSFVMDH 193
            ..|...|.:....|    ::.|....::....:.::...:....:.|.|        |:.|:.:.
plant   148 AHQMSALVDLINFYGWKEVISVYSDDELGRNGVSALDDELYKKRSRISYKVPLSVHSDEKFLTNA 212

  Fly   194 KYKSLLQNIQTRHVITAIAKDGKREREEQIEKLR--------------NLDINNFFILGTLQSIR 244
            ..||  ::|..|..|.....|......:..:||:              ::.:::....|||:.:.
plant   213 LNKS--KSIGPRVYILHFGPDPLLRIFDIAQKLQMMTHEYVWLATDWLSVTLDSLSDKGTLKRLE 275

  Fly   245 MVL-------ESVKPAYFERN---------FAWHA------ITQNEGEISSQRDNATIMFMKPMA 287
            .|:       ||||..:|...         :|.||      |.....|:.::..|.|..:.:.:.
plant   276 GVVGLRQHIPESVKMEHFTHKLQSNRSMNAYALHAYDTVWMIAHGIEELLNEGINITFSYSEKLL 340

  Fly   288 YTQYRDRLGLLRTTYNLNEEPQLSSAFYFDLALRSFLTIKEMLQSGAWPKDMEYLNCDDFQGGNT 352
            :.: ..:|.|.:..:..:.|..|..     |...:|..|...:|.|:   ....:.| |::..|.
plant   341 HAR-GTKLHLEKIKFFNSGELLLEK-----LLKVNFTGIAGQVQFGS---GRNVIGC-DYEIINV 395

  Fly   353 PQRNLDLRDYFTKITEPTSYGTFDLVTQSTQPFNGHSFMKFEMDINVLQIRGGSSVNSKSIG--K 415
            .:.::....:::|      .|.|.:|...|:    ||..|            .|.|:.:.:|  .
plant   396 NKTDVHTVGFWSK------NGGFSVVAPKTR----HSQKK------------TSFVSDEKLGDIT 438

  Fly   416 WISGLNSE----LIVKDEEQMKNLTADTVYRIFTVVQAPFIMRDETAPKGYKGYCIDLINEIAAI 476
            |..|...:    :|....:.:|.:    |.|..:.|:  |:..::.:....:|:|||:.  |.|:
plant   439 WPGGGREKPRGWVIADSADPLKIV----VPRRVSFVE--FVTEEKNSSHRIQGFCIDVF--IEAL 495

  Fly   477 VHFDYTIQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGI 541
            ....|::..:.: .|||...:..:|.:::.:.|...|..:|.::::..|..::||:.||.. .|:
plant   496 KFVPYSVPYIFE-PFGNGHSSPNYNHLIQMVTDGVYDAAVGDIAIVPSRSKLVDFSQPYAS-TGL 558

  Fly   542 TIMMQRPSSPSSLFKFLTVLETNVWLCILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKRE 606
            .:::. .:..::.:.||....:.:|..:|.::...:.::||.:       ....|.::....:: 
plant   559 VVVIP-ANDDNATWIFLRPFTSRLWCVVLVSFLVIAVVIWILE-------HRINEDFRGPPRRQ- 614

  Fly   607 FNLKECLWFCMTSLTPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVES 671
              |...|.|..::|..:...:...||: |||...|.....::.|||||||.:.|||.:|.:.:..
plant   615 --LSTMLLFSFSTLFKRNQEDTISNLA-RLVMIVWLFLLMVLTASYTANLTSILTVQQLPSAITG 676

  Fly   672 LDDL-AKQYKILYAPLNGSSAMTYFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSD 735
            :|.| |.:..|      |..|.|:     .:|.:.|.:           .:.||:|...|  .::
plant   677 IDSLRASEVPI------GYQAGTF-----TLEYLTYSL-----------GMARSRLVPLD--STE 717

  Fly   736 KYTKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDIRYLQL---TNCDLQVVGEEFSR 797
            :|.|      ..||..|....||.:              ..::.|::|   .....::|||.|..
plant   718 EYEK------ALKLGPTNWGGVAAI--------------VDELPYIELFLAERTGFKIVGEPFMH 762

  Fly   798 KPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCD-KPEDQSDGISIQNIGG 861
            :.:..|.::.|.|....:.|||.|...|:|:::::||........|.: .||...  :.:::..|
plant   763 RGWGFAFKRDSPLAIDMSTAILKLSETRKLQEIRKKWLCKTNCAGKSNWNPEPNQ--LHLKSFKG 825

  Fly   862 VFIVIFVGIGMACITLVFEYW----------WYRYRKNPRIIDVAEAN 899
            :::|        ||.:....:          :.|||:..|...:..|:
plant   826 LYLV--------CIAITVSAFLVFVLRMIRQFVRYRRMERTSSMPRAS 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606 84/454 (19%)
PBP2_iGluR_putative 438..836 CDD:270435 89/401 (22%)
GLR5NP_565744.1 PBP1_GABAb_receptor_plant 32..416 CDD:380645 77/415 (19%)
GluR_Plant 458..800 CDD:270404 89/407 (22%)
Lig_chan 578..832 CDD:459656 69/318 (22%)

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