DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and GLR2.2

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_180048.1 Gene:GLR2.2 / 817008 AraportID:AT2G24720 Length:920 Species:Arabidopsis thaliana


Alignment Length:1008 Identity:198/1008 - (19%)
Similarity:352/1008 - (34%) Gaps:285/1008 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KTSKILWLLGFLSLLSSFSLEIA-----AQTTQNINVLFINEVDNEPAAKAVEVVLTYLKKNIR- 65
            |.||:.:  .||.|...|.||.:     .:|..||.|:      ::......:|.:..:..::. 
plant     2 KNSKLFF--RFLFLFFFFCLESSRGQDNGKTQVNIGVV------SDVGTSYPDVAMLCINMSLAD 58

  Fly    66 -YGLSVQLDS-IEANKSDAK--------VLLEAICNKYATSI----------------EKKQTPH 104
             |....|..: :..|..|:|        ..::.|.||...:|                :|.:.|.
plant    59 FYSSRPQFQTRLVVNVGDSKNDVVGAATAAIDLIKNKQVKAILGPWTSMQAHFLIEIGQKSRVPV 123

  Fly   105 LILDTTKSGIAS--------ETVKSFTQALGLPTISASYGQQGDLRQWRDLDEAKQKYLLQVMPP 161
            :....|...:.|        .|.:..:|...:..|...:|       ||                
plant   124 VSYSATSPSLTSLRSPYFFRATYEDSSQVHAIKAIIKLFG-------WR---------------- 165

  Fly   162 ADIIPEAIRSIVIHMNITNAAILYDDSF---VMDHKYKSLLQNIQTRHVITAIAKDGKREREEQI 223
             :::|                :..|::|   :|.....| ||:|..|....::......:::..:
plant   166 -EVVP----------------VYIDNTFGEGIMPRLTDS-LQDINVRIPYRSVIPLNATDQDISV 212

  Fly   224 EKLRNLDI-NNFFILGTLQSIRMV-------LESVKPAYFERNFAWHAITQNEGEISSQRD-NAT 279
            |.|:.::: ...||:....|:...       |..:||.|     .|  |..| |.:...|. |.|
plant   213 ELLKMMNMPTRVFIVHMSSSLASTVFIKAKELGLMKPGY-----VW--ILTN-GVMDGLRSINET 269

  Fly   280 -------IMFMKPMAYTQYRDRLGLLRTTYNLNEEPQLSSAFY----FDLALRSFLTIKEMLQSG 333
                   ::.:|  .|......|...|:.:. ...||:....|    :|......:.|::     
plant   270 GIEAMEGVLGIK--TYIPKSKDLETFRSRWK-RRFPQMELNVYGLWAYDATTALAMAIED----- 326

  Fly   334 AWPKDMEYLNCDDFQGGNTPQRN-LDLRDYFTKITEPTSYGTFDLVTQSTQPFNG----HSFMKF 393
            |...:|.:.|.|  .|.|..:.: |.|..:..|:          |.|.||..|.|    ..|:..
plant   327 AGINNMTFSNVD--TGKNVSELDGLGLSQFGPKL----------LQTVSTVQFKGLAGDFHFVSG 379

  Fly   394 EMDINVLQIRGGSSVNSKSIGKWISGLNSELIVKDEEQMKNLTA-----DTVYRIFTVVQAPFIM 453
            ::..:|.:|........:|||.|..|  :.|:.|.:::.:::..     |.:..|....:|    
plant   380 QLQPSVFEIVNMIGTGERSIGFWTEG--NGLVKKLDQEPRSIGTLSTWPDHLKHIIWPGEA---- 438

  Fly   454 RDETAPKGY------------------------------------KGYCIDLINEIAAIVHFDYT 482
              .:.|||:                                    ||:|||....:...:.:|.:
plant   439 --VSVPKGWEIPTNGKKLRIGVPKRIGFTDLVKVTRDPITNSTVVKGFCIDFFEAVIQAMPYDVS 501

  Fly   483 IQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDL-VGITIMMQ 546
            .:.....| .|.:..|..|.:|.::...|.|..:|..:::|.|...:|||:|:... ||:.:.: 
plant   502 YEFFPFEK-PNGEPAGNHNDLVHQVYLGQFDAVVGDTTILANRSSFVDFTLPFMKSGVGLIVPL- 564

  Fly   547 RPSSPSSLFKFLTVLETNVWLCILAAYFFTSFLMWIF------DRWSPYSYQNNREKYKDDEEKR 605
            :.......|.||..|...:||..|..:|.....:|..      |...|.:||             
plant   565 KDEVKRDKFSFLKPLSIELWLTTLVFFFLVGISVWTLEHRVNSDFRGPANYQ------------- 616

  Fly   606 EFNLKECLWFCMTSL--TPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTP 668
               .....||..:::  .|:   |...:...|.:..||:....::..||||:||:.||..:|:..
plant   617 ---ASTIFWFAFSTMVFAPR---ERVLSFGARSLVVTWYFVLLVLTQSYTASLASLLTSQQLNPT 675

  Fly   669 VESLDDLAKQYKILYAPLNGSSAMTYFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPV 733
            :.|:..|          |:....:.| :|.|.|      :.|   ||:  |...:|.|..:|   
plant   676 ITSMSSL----------LHRGETVGY-QRTSFI------LGK---LNE--TGFPQSSLVPFD--- 715

  Fly   734 SDKYTKMWQAMQEAKLPATLDEAVAR-VRNSTAATGFAFLGDATDIRYLQL---TNCD-LQVVGE 793
                     ..:|.      ||.:.: .:|...|.  ||||..    |::|   ..|: .::|.|
plant   716 ---------TAEEC------DELLKKGPKNGGVAA--AFLGTP----YVRLFLGQYCNTYKMVEE 759

  Fly   794 EFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDG----- 853
            .|:...:......||.|....:.|||.:....:..:|:..|:|..|  ..|..|....|.     
plant   760 PFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAVELEHAWFKKKE--QSCPDPVTNPDSNPTVT 822

  Fly   854 ---ISIQNIGGVFIVIFVGIGMACITLVFEYWW 883
               :.:.:...:|:|:||...:|.....|.:.|
plant   823 AIQLGVGSFWFLFLVVFVVCVLALGKFTFCFLW 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606 77/443 (17%)
PBP2_iGluR_putative 438..836 CDD:270435 94/447 (21%)
GLR2.2NP_180048.1 PBP1_GABAb_receptor_plant 33..412 CDD:380645 81/455 (18%)
GluR_Plant 452..801 CDD:270404 87/415 (21%)

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