Sequence 1: | NP_001260049.1 | Gene: | Ir25a / 33683 | FlyBaseID: | FBgn0031634 | Length: | 947 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_077355.2 | Gene: | Grid2 / 79220 | RGDID: | 68368 | Length: | 1007 | Species: | Rattus norvegicus |
Alignment Length: | 1017 | Identity: | 233/1017 - (22%) |
---|---|---|---|
Similarity: | 417/1017 - (41%) | Gaps: | 214/1017 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 LLGFLSLLSSFSLEIAAQTTQNINVLFINEVDNEPAAKAVEVVLTY---LKKNIRY----GLSVQ 71
Fly 72 LDSIEANKSDAKVLLEAICNKYATSIEKKQTPHLILDTTKSGIASETVKSFTQALGLPTISASYG 136
Fly 137 QQGDLRQWRDLDEAKQK--YLLQVMPPADIIPEAIRSIVIHMNITNAAILYDDSFVMDHKYKSLL 199
Fly 200 QNIQTRHVITAIAKDGKREREEQIEKLRNLDINNFFILGTLQSIRMVLESVKPAYFERNFA---- 260
Fly 261 ----------------WHAITQNEGEISSQRDNATIMFMKPMAYTQYRDRLGLLRTTY----NLN 305
Fly 306 E-----------------EP-----QLSSAFYFDLALRSFLTIKEMLQSGAWPKDMEYLNC---- 344
Fly 345 -DDFQGGNTPQRNLDLRDYFTKITEPTSYGTFDLVTQSTQPFNGHSFMKFEMDINVLQIRGGSSV 408
Fly 409 NS--KSIGKW--ISGLNSELIVKDEEQMKNLTADTVYRIFTVVQAPFIMRDETA---PKGYKGYC 466
Fly 467 IDLINEIAAIVHFDYTIQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDF 531
Fly 532 TVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLCILAAYFFTSFLMWIFDRWSPYSYQNNRE 596
Fly 597 KYKDDEEKREFNLKECLWFCMTSLTPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLT 661
Fly 662 VSRLDTPVESLDDLAKQYKILYAPLNGSSAMTY--------FERMSNIEQMFYEIWKDLS-LNDS 717
Fly 718 LTAVERSKLAVWDYPVSDKYTKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDIRYLQ 782
Fly 783 LT--NCDLQVVGEEFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWW-KNDEALAKC 844
Fly 845 D-----KPEDQSDGISIQNIGGVFIVIFVGIGMACITLVFEYWWYRYRKNPRI--------IDVA 896
Fly 897 EANAERSNAA----DHPGKLVDGVILGHSGEKFEKSKAALRP 934 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir25a | NP_001260049.1 | PBP1_iGluR_AMPA_Like | 40..426 | CDD:107378 | 75/449 (17%) |
PBP2_iGluR_putative | 438..836 | CDD:270435 | 120/412 (29%) | ||
Lig_chan | 565..870 | CDD:278489 | 85/321 (26%) | ||
Grid2 | NP_077355.2 | Interaction with CBLN1 homotrimer. /evidence=ECO:0000250|UniProtKB:O43424 | 24..345 | 55/355 (15%) | |
Periplasmic_Binding_Protein_type1 | 28..429 | CDD:415822 | 74/447 (17%) | ||
PBP2_iGluR_delta_2 | 440..806 | CDD:270449 | 119/411 (29%) | ||
Interaction with AP4M1. /evidence=ECO:0000269|PubMed:14572453 | 921..991 | ||||
PDZ-binding. /evidence=ECO:0000250 | 1005..1007 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350001 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.740 |