DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and Ir94d

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster


Alignment Length:702 Identity:129/702 - (18%)
Similarity:227/702 - (32%) Gaps:248/702 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 IMFMKPMAYTQYRDRLGLLRTTYNLNEEPQLSSAFYFDLALRSFLTIKEMLQSGAWPKD-MEYLN 343
            |::..|::..|.::.   .|.||:|.|.|.           .:.|||..:..|   |:| :|.| 
  Fly    51 ILWQLPVSVLQIKEH---SRETYSLLENPS-----------HNVLTIAFVNDS---PEDILEIL- 97

  Fly   344 CDDFQGGNTPQRNLDLRDYFTKITEPTSYGTFDLVTQSTQPFNGHSFMKFEMDINVLQIRGGSSV 408
                      .|||.:                    .:|||              ||.:...|::
  Fly    98 ----------YRNLRM--------------------LNTQP--------------VLLVIRKSTI 118

  Fly   409 NSKSIGKWISGLNSEL---IVKDEEQMKNLTADTVYRIFTVVQAPFIMRD--------ETAPKGY 462
            ...|:.:|.  .:.:|   :...::.|::|...: |..|.|:|  ||.|.        |...:..
  Fly   119 RVNSLLEWC--WHHQLLKVVAIAQDFMESLIVYS-YNPFPVLQ--FIERRLDNSTVIFEKRLENL 178

  Fly   463 KGYCIDLI---NEIAAIVHFDYTIQEVEDGKFGN------------------MDENGQWNGIVKK 506
            .||.:.:.   :....||:.|...:.:..|..||                  .||:.     :..
  Fly   179 HGYEVPIALGGSSPRLIVYRDLEGKLIFSGPVGNFMKSFEQRYNCRLVQPYPFDESA-----ISP 238

  Fly   507 LMDKQADIGLGSMSVMAEREIVIDFTVPY------YDLVGITIMMQRPSSPSSLFKFLTVLETNV 565
            ..|..|.:..||:.:...   .|...|||      .:|:...:||..|........:..|.....
  Fly   239 ARDLIASVQNGSVQIALG---AIYPQVPYTGYSYPIELMSWCLMMPVPEEVPHSQLYSMVFSPMA 300

  Fly   566 WLCILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKECLWFCMTSLTPQGGGE--- 627
            :...:.|....|..:.:..|...|     |..:.      |:.|.:.   |:..:..|...|   
  Fly   301 FGITIVAMVLISLTLSMALRLHGY-----RVSFS------EYFLHDS---CLRGVLSQSFYEVLR 351

  Fly   628 APKNLSGRLVAATW---WLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGS 689
            ||     .|:.|.:   .|.|.:|.:.|.:..:.|:|.:.....:.|.:.:              
  Fly   352 AP-----ALIKAMYLVICLLGLLITSWYNSYFSTFVTSAPRFPQLTSYESI-------------- 397

  Fly   690 SAMTYFERMSNIEQMFYEIWKD-----LSLNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAKL 749
                   |.|||:.:   |||.     |..::::                :||:.::|..::.| 
  Fly   398 -------RHSNIKIV---IWKPEYEMLLFFSENM----------------EKYSSIFQLQEDYK- 435

  Fly   750 PATLDEAVARVRNSTAATGFAFLGDATDIRYLQLTNCDLQVVGEE------------------FS 796
                              .|..|.|:.|.||..:...:...:.:|                  |.
  Fly   436 ------------------EFLHLRDSFDTRYGYMMPMEKWSLMKEQQRVFSSPLFSLQDDLCVFH 482

  Fly   797 RKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKP-----EDQS--DGI 854
            ..|....:.:.|..|:.|:..||.:.....|.:     |: |.:..:..|.     ||:.  ...
  Fly   483 TVPIVFPMVKNSIFKEPFDRLILDVTATGLLSR-----WR-DMSFTEMIKAGQLGLEDRGHPKEF 541

  Fly   855 SIQNIGGVF-IVIFVG--IGMACITLVFE---YW----W----YRYRKNPRI 892
            ....:|.:. |..|||  :|:|.|..:.|   :|    |    |.:.:|..|
  Fly   542 RAMKVGDLIQIWRFVGWMLGLATIVFLLELICFWRHKMWQNMKYMFCRNKNI 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 29/149 (19%)
PBP2_iGluR_putative 438..836 CDD:270435 79/461 (17%)
Lig_chan 565..870 CDD:278489 58/343 (17%)
Ir94dNP_001138099.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463124
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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