DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and si:ch211-251b21.1

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001138274.1 Gene:si:ch211-251b21.1 / 571720 ZFINID:ZDB-GENE-060809-5 Length:458 Species:Danio rerio


Alignment Length:506 Identity:123/506 - (24%)
Similarity:237/506 - (46%) Gaps:90/506 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 RIFTVVQAPFIMRDETAPKG--YKGYCIDLINEIAAIVHFDYTIQEVEDGKFGNMDENGQWNGIV 504
            ::.|:.:.|:.|     .||  .:|:|||:::.|:..:.|.|.:..|:||::|..|::|.|||::
Zfish    26 KVTTIKEEPYAM-----SKGSELEGFCIDMLSAISNKLGFKYDVHLVKDGRYGKTDDSGNWNGMI 85

  Fly   505 KKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRP--SSPSSLFKFLTVLETNVWL 567
            .:::..:|||.:..:::.|:||.|:|.:.|:.. .|::.:|::.  |..|.....|.:..|.:|:
Zfish    86 GEVVRGEADIAVAPLTLTAQREAVVDMSKPFMQ-TGLSFIMRKDLGSDDSQFLSLLKLFSTEMWM 149

  Fly   568 CILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKECLWFCMTSLTPQGGGEAPKNL 632
            .:|.||..||..:::..|.||..::      :.:::...|.|....|:.:.:||.||.|..||.|
Zfish   150 GVLVAYLLTSICIFLVSRISPCEWE------QPEKDNNSFTLSHSFWYTVGALTLQGAGPHPKAL 208

  Fly   633 SGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMTYFER 697
            |||::.:.||:|..:::|.|.|||:.:|........:::.:|||.|..|.|..:..||:..:|:.
Zfish   209 SGRVITSIWWIFSLVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNVIEYGTIKDSSSFNFFKN 273

  Fly   698 MSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAKLPATLDEAVARVRN 762
            .:|                                  ..|.::::.::|           |:..:
Zfish   274 SNN----------------------------------PTYHRIYEHIKE-----------AQSYS 293

  Fly   763 STAATGF--------AFLGDATDIRYLQLTNCDLQVVGEEFSRKPYAIAVQQGSHLKDQFNNAIL 819
            ..||.||        ||:|::..:.......|:|....|....:.|:||...||.|....:.|||
Zfish   294 LNAAEGFRRAQKGNYAFIGESVSLDLAVARYCNLTRAPEIIGMRGYSIAAPLGSPLIKNLSVAIL 358

  Fly   820 TLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGISIQNIGGVFIVIFVGIGMACITLVFEYWWY 884
            .|....:|:..:.|||     .:.|...:.:...:...::.|||:::..|:|:.....:.|.   
Zfish   359 RLSESGELDYFRSKWW-----ASSCVAKDSKGAPLKPASLKGVFLLLAFGLGLGIFLALMEL--- 415

  Fly   885 RYRKNPRIIDVAEANAERSN-----AADHPGKLVDGVILGHSGEKFEKSKA 930
             ..|:.::     ||:|:.:     :|:...:...|.:.  :.|..||:||
Zfish   416 -AAKSRKV-----ANSEQKSCCSVMSAELSQRFRGGEVA--TPESSEKNKA 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606
PBP2_iGluR_putative 438..836 CDD:270435 104/405 (26%)
si:ch211-251b21.1NP_001138274.1 PBP2_iGluR_non_NMDA_like 25..375 CDD:270403 105/410 (26%)
Blue background indicates that the domain is not in the aligned region.

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