DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and GluRIB

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster


Alignment Length:1077 Identity:239/1077 - (22%)
Similarity:406/1077 - (37%) Gaps:315/1077 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SKILWLLGFLSLLSSFSLEIAAQ--TTQNINVLFINEVDNEPAAKAVEVVLTYLKKNI---RYGL 68
            |.:|||...........:.::||  .|:.|.:..|.|...:....|.:..:.....|:   |:.|
  Fly    13 SFLLWLTWSSGGGGGSGVGVSAQPSLTEKIPLGAIFEQGTDEVQSAFKYAMLNHNLNVSSRRFEL 77

  Fly    69 SVQLDSIEANKSDAKVLLEAICNKYATSIEKKQTPHLILDTTKSGIASETVKSFTQALGLPTISA 133
            ...:|.|  |.:||..|...|||:::..:      :.:|... |..:.:|:.|::....:|.::.
  Fly    78 QAYVDVI--NTADAFKLSRLICNQFSRGV------YSMLGAV-SPDSFDTLHSYSNTFQMPFVTP 133

  Fly   134 SYGQQGDLRQWRDLDEAKQKYLLQVMPPADIIPEAIRSIVIHMNITNAAILYDDSFVMDHKYKSL 198
            .:.::........||     :.|.:.|.   ..:||...:..........|||       .:..|
  Fly   134 WFPEKVLTPSSGFLD-----FALSMRPD---YHQAIIDTIQFYGWRKIIYLYD-------SHDGL 183

  Fly   199 LQNIQTRHVITAIAKDGKREREEQIEKLRNLDINNFFILGTLQSIRMVLESVKPAYFERNFAWHA 263
            |   :.:.:...:....:..:.|.::::.|:.:...| |.||:.|         ..||..   |.
  Fly   184 L---RLQQIYQGLRPGNESFQVELVKRISNVSMAIEF-LHTLEQI---------GRFENK---HI 232

  Fly   264 ITQNEGEISSQRDNATIMFMKPMAYTQYRD-RLGLLRTTYNLNEEPQLSSAFYFDLALRSFLTIK 327
            :.....|::.|           :.....|| |||  |.||:     .|.|....|....|     
  Fly   233 VLDCPTEMAKQ-----------ILIQHVRDLRLG--RRTYH-----YLLSGLVMDDRWES----- 274

  Fly   328 EMLQSGAWPKDMEYLNCDDFQGGNTPQRNL-DLRDYFTKITEPTSYGT------------FDLVT 379
            |:::.||       :|...|:..:|.:|.: :..|.:.::....|.|.            :|.|.
  Fly   275 EIIEFGA-------INITGFRIVDTNRRLVREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVF 332

  Fly   380 QSTQPFNGHSFMKFEMDINVLQIR--------------------------------GGSSVNSKS 412
            ...:.||.....|.:...|.:|.|                                ||....|.|
  Fly   333 VLVEAFNKILRKKPDQFRNNVQRRSQTLMVAQAAASTSSDGYNYSASGGGGGNGGAGGGFAGSDS 397

  Fly   413 -------------------IGKW--------------ISGLNSELIVKDEEQMKNLTADTV---- 440
                               :..|              |.||..::...|:.:..|.|...|    
  Fly   398 GGSGGMASRALDCNTAKGWVNAWEHGDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTV 462

  Fly   441 -------------------------------------YRIFTVVQAPFIMRDETA-------PKG 461
                                                 |.:.||::.|:||..:.|       ...
  Fly   463 NSAMVKVAEWNDDAGLQPLNAKYVRLRPHVEFEKNRTYIVTTVLEEPYIMLKQVAFGEKLHGNNR 527

  Fly   462 YKGYCIDLINEIAAIVHFDYTIQEVEDGKFGN--MDENGQWNGIVKKLMDKQADIGLGSMSVMAE 524
            ::|||.||.:.:|..:..:|.::.|:||.:|:  ...:|.|:|:|.:|:.|:|||.:.:|::.||
  Fly   528 FEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELVRKEADIAIAAMTITAE 592

  Fly   525 REIVIDFTVPYYDLVGITIMMQRP-SSPSSLFKFLTVLETNVWLCILAAYFFTSFLMWIFDRWSP 588
            ||.||||:.|:..| ||:||:::| .....:|.|:..|...:|:.::.:|...|.:::...|:||
  Fly   593 RERVIDFSKPFMSL-GISIMIKKPVKQTPGVFSFMNPLSQEIWVSVIFSYIGVSIVLFFVSRFSP 656

  Fly   589 YSY----QNNREKYKDDEEK--------------------------------------------- 604
            :.:    |..::....|...                                             
  Fly   657 HEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPPTPGAQTAAGAAALQAALSA 721

  Fly   605 -------------REFNLKECLWFCMTSLTPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANL 656
                         .||::....||.:.:...||...:|:::|||:.||:|:.|..|:|:||||||
  Fly   722 GSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANL 786

  Fly   657 AAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMTYFERMSNIEQMFYEIWKDLSLNDSLTAV 721
            ||||||.|:.||:.|.:|||.|.::.|..|...|...:|                          
  Fly   787 AAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGSTWDFF-------------------------- 825

  Fly   722 ERSKLAVWDYPVSDKYTKMWQAMQEAK---LPATLDEAVARVRNSTAATGFAFLGDATDIRYLQL 783
            .||::.:        :.|||:.|...|   :| |.||.:.|||||...  :|.|.::....|:..
  Fly   826 RRSQIGL--------HNKMWEYMNSRKHVFVP-TYDEGIKRVRNSKGK--YALLVESPKNEYVNA 879

  Fly   784 TN-CDLQVVGEEFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKP 847
            .. ||...||.....|.:.||...||.|||..|.|:|||....:|.||:.|||...   |:|...
  Fly   880 REPCDTMKVGRNLDTKGFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEK---AECSTH 941

  Fly   848 ED---QSDGISIQNIGGVFIVIFVGIGMACITLVFEY 881
            :|   ....:|:.|:.|:|.::..|:.::....:.||
  Fly   942 KDGETSHSELSLSNVAGIFYILIGGLLVSVFVAILEY 978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 81/467 (17%)
PBP2_iGluR_putative 438..836 CDD:270435 136/514 (26%)
Lig_chan 565..870 CDD:278489 97/373 (26%)
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 85/504 (17%)
ANF_receptor 55..461 CDD:279440 83/475 (17%)
PBP2_iGluR_AMPA 497..938 CDD:270433 137/481 (28%)
Lig_chan 632..967 CDD:278489 97/374 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462574
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 169 1.000 Inparanoid score I1556
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.890

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