DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and Ekar

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster


Alignment Length:966 Identity:244/966 - (25%)
Similarity:415/966 - (42%) Gaps:232/966 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GFLSLLSSFSLEIAAQTTQNINVLFINEVDNEPAAKAVEVVLTY------LKKNIRYGLSVQLDS 74
            ||| |....|..:.......|..:|    .|:|.....|:...|      :.|::....:|....
  Fly     6 GFL-LFQFLSYGLGVPPLVRIGAIF----SNQPGMYNSELAFRYAIHRLNMDKSLLPETTVDYYV 65

  Fly    75 IEANKSDAKVLLEAICNKYATSIEKKQTPHLILDTTKSGIASETVKSFTQALGLPTISASYGQQG 139
            ...|:.|:...::.:|......::...:|      |.|.:|:. :.|...||.:|.|..|     
  Fly    66 EYVNRFDSFETVQKVCKLIRVGVQAVFSP------TDSVLATH-INSICDALDIPNIGRS----- 118

  Fly   140 DLRQWRDLDEAKQKYLLQVMPPADIIPEAIRSIVIHMNITNAAILY--DDSFVMDHKY-KSLLQN 201
                       ...:.:.|.|...::..|...::.::|.|...||:  ::..:..|:. :|....
  Fly   119 -----------AHDFSINVYPSKQLVNYAFNDVIQYLNWTRFGILHEKENGIINLHQLSRSFHGE 172

  Fly   202 IQTRHVITAIAKDGKREREEQIEKL---RNLDINNFFILGTLQSIRMVLESV--------KPAY- 254
            :..|.|          .|:..:..|   :..:|:|..|......|.::|:::        |..| 
  Fly   173 VHMRQV----------SRDSYVSALNEFKGKEIHNIIIDTNSNGISILLKNILQQQMNEYKYHYL 227

  Fly   255 -------------FERNFAWHAITQNEGEISSQR--DNATI---------------MFMKPMAYT 289
                         |:.||.         .|:|.|  |.|.:               :|.||..  
  Fly   228 FTSFDLETYDLEDFKYNFV---------NITSFRLVDTADVGVKQILKDIGLYSHHIFKKPYL-- 281

  Fly   290 QYRDRLGLLRTTYNLNEEPQL--SSAFYFDLALRSF-----LTIKEML--QSGAWPKDM---EYL 342
                .|.:.::|. |..||.|  .|.:.|.:.|::.     ||:..:.  :..:|...:   .||
  Fly   282 ----NLHIKKSTI-LESEPALMFDSVYVFAIGLQTLEQSHSLTLLNISCEEENSWDGGLSLINYL 341

  Fly   343 NCDDFQG---------GNTPQRNLDL----RDYFTKITEPTSYGTFDLVTQSTQPFNGHSFMKFE 394
            |..:::|         |...|..|||    :....|:.|.|.:|..::    |:|     .|.|:
  Fly   342 NAVEWKGLTGPIQFKDGQRVQFKLDLIKLKQHSIVKVGEWTPHGHLNI----TEP-----SMFFD 397

  Fly   395 MDINVLQIRGGSSVNSKSIGKWISGLNSELIVKDEEQMKNLTADTVYRIFTVVQAPFIM----RD 455
                     .||             :|..|:|                 .|:::.|::|    ::
  Fly   398 ---------AGS-------------MNVTLVV-----------------ITILETPYVMMHYGKN 423

  Fly   456 ETAPKGYKGYCIDLINEIAAIVHFDYTIQEVEDGKFGNMD-ENGQWNGIVKKLMDKQADIGLGSM 519
            .|..:.:.|:|:|::..|:..|.|||.:..|.|.|:|..| |.|:|||:|.:||..:||:.:|||
  Fly   424 FTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSM 488

  Fly   520 SVMAEREIVIDFTVPYYDLVGITIMMQRPSS-PSSLFKFLTVLETNVWLCILAAYFFTSFLMWIF 583
            ::...||.|||||.|:.:| ||:|:.:.|:| |:.||.|:..|...:|:.:|.|||..|..::|.
  Fly   489 TITYARESVIDFTKPFMNL-GISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIV 552

  Fly   584 DRWSPYSYQ-NNREKYKDDEEKREFNLKECLWFCMTSLTPQGGGEAPKNLSGRLVAATWWLFGFI 647
            .:.||..:: .|....::.....:|:|.:..||.:.:...|.....|:.:|.|::::||..|..|
  Fly   553 GKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLI 617

  Fly   648 IIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMTYFERMSNIEQMFYEIWKDL 712
            |:||||||||||||..|:..|:|:.:|||.|.:|.|..|:..|.||:|                 
  Fly   618 IVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMTFF----------------- 665

  Fly   713 SLNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAKLPA---TLDEAVARVRNSTAATGFAFLGD 774
              .||               |.:.|.|:|::|...|..|   |.::.:.||...    .:|||.:
  Fly   666 --RDS---------------VIETYKKIWRSMDNKKPSAFTTTYEDGIKRVNQG----NYAFLME 709

  Fly   775 ATDIRYLQLTNCDLQVVGEEFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKN-D 838
            :|.:.|:...:|:|..:|.....|.|.||..:||..:|:.:.|||.|..:..::.|.:||||| |
  Fly   710 STMLDYIVQRDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNTD 774

  Fly   839 EALA-KCDKPEDQSDGISIQNIGGVFIVIFVGIGMACITLVFEYWW---YRYRKNP 890
            |... |....:.:::.:.:::|||||:|:..||.:|.:...||:|:   |.|...|
  Fly   775 ETCTRKNTSKQSKANSLGLESIGGVFVVLIAGIIVAAVVAFFEFWYNFRYNYEATP 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 84/461 (18%)
PBP2_iGluR_putative 438..836 CDD:270435 132/407 (32%)
Lig_chan 565..870 CDD:278489 95/310 (31%)
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 77/416 (19%)
ANF_receptor 39..371 CDD:279440 69/380 (18%)
PBP2_iGluR_Kainate 402..771 CDD:270432 135/424 (32%)
Lig_chan 533..807 CDD:278489 95/311 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463128
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6275
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.790

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