DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and Ir85a

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster


Alignment Length:274 Identity:56/274 - (20%)
Similarity:101/274 - (36%) Gaps:55/274 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   627 EAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAK-QYKILYAPLNGSS 690
            :.|.|.|.||....|..||.:|.:::..||.:.:........:..|..||: .|.|:..|.:...
  Fly   364 QIPPNHSIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRHVKH 428

  Fly   691 AMTYF----ERMSNIEQMFYEI----WKDLSLNDSLTAVERSKLAVWDYPVSDKY-----TKMWQ 742
            ...:.    :..|.|.:...|:    ..::..|:.:......|..:..:.|:.:.     ..::.
  Fly   429 IQHFLTLGHKHESRIREQMLEVSDTQMYEMMRNNDIRFAYLEKYHIARFQVNSRVHMHLGRPLFH 493

  Fly   743 AMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDIRYLQLTNCDLQVVGEEFSRKPYAIAVQQG 807
            .|....:|.   .||..|...:...||.   |:. ||           ...||..:.|...:...
  Fly   494 LMNSCLVPF---HAVYIVPYGSPYLGFL---DSL-IR-----------SSHEFGFERYWDRIMNS 540

  Fly   808 SHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGISIQNIGGVFIVIFVGIGM 872
            :.:|..     :.::|:|       :...|||.:.           :.:|:...||.:..|||||
  Fly   541 AFIKSG-----VKVVNRR-------RGSGNDEPVV-----------LKLQHFHAVFALWLVGIGM 582

  Fly   873 ACITLVFEYWWYRY 886
            |||.|.:|:..:.|
  Fly   583 ACIVLAWEHLTHNY 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378
PBP2_iGluR_putative 438..836 CDD:270435 39/222 (18%)
Lig_chan 565..870 CDD:278489 46/256 (18%)
Ir85aNP_649833.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463077
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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