DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and Ir84a

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster


Alignment Length:674 Identity:137/674 - (20%)
Similarity:238/674 - (35%) Gaps:171/674 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 NATIMFMKPMAYTQYRDRL--GLLRT-TYNLNEEPQL---------SSAFYFDLALRSFLTIKEM 329
            |..:.|.:|.....:.|.:  |..|| ...||.|..|         |.|.||:.:|..|:     
  Fly    73 NYRVQFYRPEMSANFEDLMFYGSPRTAVLVLNSEHVLVRRQVFGVASEAGYFNNSLAWFI----- 132

  Fly   330 LQSGAWPKDMEYLNCDDFQGGNTPQRNLDLRDYFTKITEPTS-----YGTFDLVTQSTQPF---- 385
            |.||.....:|.| .|....|.  :..:| .|....:..|.:     |..:.:..|:..|.    
  Fly   133 LGSGRESLPVEQL-IDQLLSGY--RMGID-ADITVALRGPDNASMLFYDVYRISRQANTPLIIEK 193

  Fly   386 -----NGHSFMKFEMDINVLQIRGGSSVNSKSIGKWI-----SGLNSELIVKDEEQMKNL--TAD 438
                 :...:.||....|...||..:.:|...||..:     .|......:.|::|::.|  ...
  Fly   194 KGLWTHSGGYQKFGNFKNTWVIRRRNFLNVTLIGSTVLTEKPPGFGDMEYLADDKQLQQLDPMQR 258

  Fly   439 TVYRIFTVVQAPFIMRDETAPKGYKGYCIDLINEIAAIVHFDYTIQEVEDGKFGNMDENGQWNGI 503
            ..|::|.:|:..|                   |...||...|         |:|.:.:||.|:|:
  Fly   259 KTYQLFQLVERMF-------------------NLSLAISLTD---------KWGELLDNGSWSGV 295

  Fly   504 VKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLC 568
            :.::..::||..:..:..:.:|:..:.::...: ...|..:.:.|........|...|...||.|
  Fly   296 MGQVTSREADFAVCPIRFVLDRQPYVQYSAVLH-TQNIHFLFRHPRRSHIKNIFFEPLSNQVWWC 359

  Fly   569 ILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKECLWFCMTSLTPQGGGEAPKN-- 631
            :||....::.|:....|         .|:...:.|.| |:.   :||.|.....|.|   |.|  
  Fly   360 VLALVTGSTILLLFHVR---------LERMLSNMENR-FSF---VWFTMLETYLQQG---PANEI 408

  Fly   632 ---LSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMT 693
               .|.||:.:...:|.|:::..|    .||:..|.|.....|:.:|...|              
  Fly   409 FRLFSTRLLISLSCIFSFMLMQFY----GAFIVGSLLSESARSIVNLQALY-------------- 455

  Fly   694 YFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYP---------VSDKYTKMWQAMQEAKL 749
                                  ||..|:....:: :::|         |.|.|.|......|..:
  Fly   456 ----------------------DSNLAIGMENIS-YNFPIFTNTSNQLVRDVYVKKICKSGEHNI 497

  Fly   750 PATLDEAVARVRNSTAATGFAFLGDATDIRY-----LQLTN---CDLQVVGEEFSRKPY--AIAV 804
             .:|.:...|:....    ||| ..|.|..|     ||:..   ||||   |.....||  ...:
  Fly   498 -MSLQQGAERIIQGR----FAF-HTAIDRMYRLLLELQMDEAEFCDLQ---EVMFNLPYDSGSVM 553

  Fly   805 QQGSHLKDQFNNAILTLLNKRQLEKLKEKWW--KNDEALAKCDKPEDQSDGISIQNIG-GVFIVI 866
            .:||..::...:|:|.......|:...:||.  :.|.:|.|..:.|     :.:::.. .:|.:.
  Fly   554 PKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAE-----VDLEHFAPALFALA 613

  Fly   867 FVGIGMACITL--VFEYWWYRYRK 888
            ...:..|.:.|  :|.:|...:|:
  Fly   614 LAMVASALVFLLELFLHWLPDFRR 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 39/179 (22%)
PBP2_iGluR_putative 438..836 CDD:270435 85/423 (20%)
Lig_chan 565..870 CDD:278489 69/331 (21%)
Ir84aNP_649720.2 nt_trans <54..>112 CDD:294020 11/38 (29%)
Periplasmic_Binding_Protein_Type_2 222..583 CDD:304360 90/455 (20%)
Lig_chan 355..602 CDD:278489 68/317 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462982
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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