DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and Ir76a

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster


Alignment Length:615 Identity:113/615 - (18%)
Similarity:201/615 - (32%) Gaps:201/615 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 DSFVMDHKYKS----------------LLQNIQTRHVITAIAKDGKREREEQIEKLRNLDINNFF 235
            |..|.|:|.|.                |...|:..|..|.||      .:|||.     :...:|
  Fly    62 DQDVYDYKIKEDEFEGKGIPYNDWTLRLTVAIERSHCETFIA------FQEQIP-----EFARYF 115

  Fly   236 ILGTLQSIRMVLESVKPAYFERNFAWHAITQNEGEISSQRDNATIMFMKPMAYT-QYRDRLGLLR 299
            ...::.||                 |.::...            .||:    || ::.|:.....
  Fly   116 YHASIYSI-----------------WRSLRNR------------FMFV----YTKEFEDKKDSYL 147

  Fly   300 TTYNLNEEPQLSSAFYFDLALRSFLTIKEMLQSGAWPKDMEYLNCDDFQGGNTPQRNLDLRDYFT 364
            :.|...::|.:       |.:.|                 :|||...|:  ....|.:..|: |.
  Fly   148 SGYIFQDQPNI-------LVITS-----------------QYLNSSTFE--IKTNRFVGPRN-FN 185

  Fly   365 KITEPTSYGTFDLVTQSTQPFNGHSFMKFEMDINVLQIRGGSSVNSKSIGKWISGLNSELIVKDE 429
            |..||..:               :...:|:            :..:|:..:..|.::|       
  Fly   186 KNPEPVEF---------------YILQRFD------------AKGTKATWETQSAMSS------- 216

  Fly   430 EQMKNLTA-DTVYRIFTVVQAPFIMRDETAPKGY------------KGYCIDLINEIAAIVHFDY 481
             :|:||.. :.|..||.  ..||::.|...|..|            .|..|.|:.....:.:...
  Fly   217 -KMRNLKGREVVIGIFD--YKPFMLLDYEKPPLYYDRFMNTTDVTIDGTDIQLMLIFCELYNCTI 278

  Fly   482 TIQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQ 546
            .:...|...:|::..|....|:|..::|::.|.|:|.|.:..|....:|.| .:....|:|.::.
  Fly   279 QVDTSEPYDWGDIYLNASGYGLVGMILDRRNDYGVGGMYLWYEAYEYMDMT-HFLGRSGVTCLVP 342

  Fly   547 RPSSPSSLFKFLTVLETNVWLCILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKE 611
            .|:...|....|...:..:|:|::......|..:.|..||...|......               
  Fly   343 APNRLISWTLLLRPFQFVLWMCVMLCLLLESLALGITRRWEHSSVAAGNS--------------- 392

  Fly   612 CLWF------CMTSL---TPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDT 667
              |.      |:::|   ..|.......:.:.|.|....::...|:...|:..|||.||:..|:.
  Fly   393 --WISSLRFGCISTLKLFVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEE 455

  Fly   668 PVESLDDLAKQYKILYAPLNGSSAMTYFER-----------------------MSNIEQMFYEIW 709
            ..:|...|. .:|:::...:.:...|..||                       .|:.|||.:.:.
  Fly   456 AADSRQRLF-DHKLIWTGTSQAWITTIDERSADPVLLGLMEHYRVYDANLISAFSHTEQMGFVVE 519

  Fly   710 K---------DLSLNDSLTAVERSKLAVWD 730
            :         :|..||   |::|.||.|.|
  Fly   520 RLQFGHLGNTELIEND---ALKRLKLMVDD 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 41/255 (16%)
PBP2_iGluR_putative 438..836 CDD:270435 69/346 (20%)
Lig_chan 565..870 CDD:278489 40/207 (19%)
Ir76aNP_001097647.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463079
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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