DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir25a and Ir75a

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster


Alignment Length:668 Identity:126/668 - (18%)
Similarity:211/668 - (31%) Gaps:250/668 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 FMKP----MAYTQYRDRLGL-----LRTTYNLNEEPQLSSAFYFDLALRSFLTIKEMLQSGAWPK 337
            ||||    :.|.|:....|:     |..:|..:.:|.|  |.|.|                    
  Fly    40 FMKPIHPILVYHQFVQMRGVLNWSHLELSYMGHTQPTL--AIYVD-------------------- 82

  Fly   338 DMEYLNCDDFQG--------------------GNTPQRNLDLRDYFTKITEPTSYGTFDLVTQST 382
                :.||..|.                    ||  |..|:..|.|         |.|::...:.
  Fly    83 ----IKCDQTQDLLEEASREQIYNQHYHWLLVGN--QSKLEFYDLF---------GLFNISIDAD 132

  Fly   383 QPFNGHSFMKFEMDINVLQIRGGSSV---------NSKSIG---------------------KWI 417
            .     |::|.::..|      ..||         |.|.||                     :.:
  Fly   133 V-----SYVKEQIQDN------NDSVAYAVHDVYNNGKIIGGQLNVTGSHEMSCDPFVCRRTRHL 186

  Fly   418 SGLNSELIVKDEEQMKNLTADTVYRIFTVV-QAPFIMRDETAPKGYKGYCIDLI--------NEI 473
            |.|.......:.||:    .|.|.|:.||| |.|..:.|:           :||        ..|
  Fly   187 SSLQKRSKYGNREQL----TDVVLRVATVVTQRPLTLSDD-----------ELIRFLSQENDTHI 236

  Fly   474 AAIVHFDYTIQEVEDG------KFGNMDENGQWN------GIVKKLMDKQADI----------GL 516
            .::..|.:.:..:...      ||...|   .|:      |.|..::|:.||:          .|
  Fly   237 DSLARFGFHLTLILRDLLHCKMKFIFSD---SWSKSDVVGGSVGAVVDQTADLTATPSLATEGRL 298

  Fly   517 GSMSVMAE----REIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLCILAAYFFTS 577
            ..:|.:.|    |.:.| |..|:...:...:.:| |.||.            ||...........
  Fly   299 KYLSAIIETGFFRSVCI-FRTPHNAGLRGDVFLQ-PFSPL------------VWYLFGGVLSLIG 349

  Fly   578 FLMWIF---------DRWSPYSYQNNREKYKDDEEKREFNLKECLWFCMTSLTPQGGGEAPKNLS 633
            .|:||.         .||        |..|..       :|.........:...|.....|::..
  Fly   350 VLLWITFYMECKRMQKRW--------RLDYLP-------SLLSTFLISFGAACIQSSSLIPRSAG 399

  Fly   634 GRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAK-QYKILYAPLNGSSAMTYFER 697
            |||:....:|..||:...||:.:.:.|..|.:.:.::::..||: ...:...||..:.:...:.|
  Fly   400 GRLIYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAESSLTVGLEPLPFTKSYLNYSR 464

  Fly   698 MSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAKLPATLDEAVARVRN 762
            :..| .:|               ::|...:....|      ::|       |||  ::.|.|||:
  Fly   465 LPEI-HLF---------------IKRKIESQTQNP------ELW-------LPA--EQGVLRVRD 498

  Fly   763 S-------TAATGFAFLGDATDIRYLQLTN-CDLQVVGEEFSRKP---YAIAVQQGSHLKDQFNN 816
            :       ..::|:|::.     ||..... |||    .|...:|   :...:.:.|..|:.|..
  Fly   499 NPGYVYVFETSSGYAYVE-----RYFTAQEICDL----NEVLFRPEQLFYTHLHRNSTYKELFRL 554

  Fly   817 AILTLLNKRQLEKLKEKW 834
            ..|.:|......|.:..|
  Fly   555 RFLRILETGVYRKQRSYW 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 36/202 (18%)
PBP2_iGluR_putative 438..836 CDD:270435 88/453 (19%)
Lig_chan 565..870 CDD:278489 55/291 (19%)
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 55/291 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462807
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.