DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and Ir68a

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:578 Identity:108/578 - (18%)
Similarity:217/578 - (37%) Gaps:138/578 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 FMKFEMD----INVLQIRG--GSSVNSKSIGKWI--SGLNSELIVKDEEQMKNLTADTVYRIFTV 446
            |:|.::|    |:.:...|  ...:..|:|..|.  .|||..::..|  :..||.. |...:...
  Fly   168 FLKRQLDNKYTISTIAFPGILSGVLVMKNIANWELGKGLNGRILFAD--KTSNLFG-TSLPVAIS 229

  Fly   447 VQAPFIMRDETAPKGYKGYCIDLINEIAAIVHF-------------DYTIQEVEDGK-----FGN 493
            ...|.::. ..|.|.::|..::::|.:...::|             |:|  |::.|.     .||
  Fly   230 EHVPMVLW-ANATKSFQGVEVEIMNALGKALNFKPVYYKPNQTENMDWT--ELDGGASVAYGSGN 291

  Fly   494 MDENGQWNG------IVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPS 552
            .|...| ||      :|.::....|...:|.:.:......:::.:.| ::...:|.:....|:.:
  Fly   292 PDGYAQ-NGTHIDSMLVDEVAAHSARFAIGDLHLFQVYLKLVELSAP-HNFECLTFLTPESSTDN 354

  Fly   553 SLFKFLTVLETNVWLCILAAYFFT-------SFLMWIFD-----------------RWSPYSYQ- 592
            |...|:......:|:.:|.:.|..       |||..|.:                 ...|..|: 
  Fly   355 SWQTFILPFSAGMWVGVLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRR 419

  Fly   593 -------NNREKYKDDEEKREF--NLKECLWFCMTSLTPQGGGEAPKNLSGRLVAATWWLFGFII 648
                   :.....|.|...|:.  ....|:....:.|........|:|...|::...:|::..::
  Fly   420 ISFRIAISRYRSSKGDRMPRDLFDGYTNCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILL 484

  Fly   649 IASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMTYFERMSNIEQMFYEIWKDLS 713
            :|:|.|:..|.|........:::|:||.:.:   ..|..|::.          .:.|:     |.
  Fly   485 VATYRASFTAILANPAARVTIDTLEDLLRSH---IPPSTGATE----------NRQFF-----LE 531

  Fly   714 LNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDI 778
            .||.:......|:.|:.|.                     |:..:|:.....    |:..:...:
  Fly   532 ANDEVARKVGEKMEVFGYS---------------------DDLTSRIAKGQC----AYYDNEFYL 571

  Fly   779 RYLQL---TNCDLQVVGEEFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKN--- 837
            |||::   :...|.::.|.....|..:|:::.|.||.:.:.:|..|..    ..|..||.|:   
  Fly   572 RYLRVADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAE----GGLIAKWLKDAIE 632

  Fly   838 ---DEALAKCDKPEDQSDGISIQNIGGVFIVIFVGIGMACITLVFEYWWYRY--RKNP 890
               .||||:      |...::||.....|:.:.:|..::.:||:.|.|.:::  .|:|
  Fly   633 HLPAEALAQ------QEALMNIQKFWSSFVALLIGYVISMLTLLAERWHFKHIVMKHP 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606 8/35 (23%)
PBP2_iGluR_putative 438..836 CDD:270435 78/458 (17%)
Ir68aNP_648455.2 Lig_chan 367..661 CDD:459656 62/346 (18%)

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