DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir25a and Ir68a

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:578 Identity:108/578 - (18%)
Similarity:217/578 - (37%) Gaps:138/578 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 FMKFEMD----INVLQIRG--GSSVNSKSIGKWI--SGLNSELIVKDEEQMKNLTADTVYRIFTV 446
            |:|.::|    |:.:...|  ...:..|:|..|.  .|||..::..|  :..||.. |...:...
  Fly   168 FLKRQLDNKYTISTIAFPGILSGVLVMKNIANWELGKGLNGRILFAD--KTSNLFG-TSLPVAIS 229

  Fly   447 VQAPFIMRDETAPKGYKGYCIDLINEIAAIVHF-------------DYTIQEVEDGK-----FGN 493
            ...|.::. ..|.|.::|..::::|.:...::|             |:|  |::.|.     .||
  Fly   230 EHVPMVLW-ANATKSFQGVEVEIMNALGKALNFKPVYYKPNQTENMDWT--ELDGGASVAYGSGN 291

  Fly   494 MDENGQWNG------IVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPS 552
            .|...| ||      :|.::....|...:|.:.:......:::.:.| ::...:|.:....|:.:
  Fly   292 PDGYAQ-NGTHIDSMLVDEVAAHSARFAIGDLHLFQVYLKLVELSAP-HNFECLTFLTPESSTDN 354

  Fly   553 SLFKFLTVLETNVWLCILAAYFFT-------SFLMWIFD-----------------RWSPYSYQ- 592
            |...|:......:|:.:|.:.|..       |||..|.:                 ...|..|: 
  Fly   355 SWQTFILPFSAGMWVGVLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRR 419

  Fly   593 -------NNREKYKDDEEKREF--NLKECLWFCMTSLTPQGGGEAPKNLSGRLVAATWWLFGFII 648
                   :.....|.|...|:.  ....|:....:.|........|:|...|::...:|::..::
  Fly   420 ISFRIAISRYRSSKGDRMPRDLFDGYTNCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILL 484

  Fly   649 IASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMTYFERMSNIEQMFYEIWKDLS 713
            :|:|.|:..|.|........:::|:||.:.:   ..|..|::.          .:.|:     |.
  Fly   485 VATYRASFTAILANPAARVTIDTLEDLLRSH---IPPSTGATE----------NRQFF-----LE 531

  Fly   714 LNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDI 778
            .||.:......|:.|:.|.                     |:..:|:.....    |:..:...:
  Fly   532 ANDEVARKVGEKMEVFGYS---------------------DDLTSRIAKGQC----AYYDNEFYL 571

  Fly   779 RYLQL---TNCDLQVVGEEFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKN--- 837
            |||::   :...|.::.|.....|..:|:::.|.||.:.:.:|..|..    ..|..||.|:   
  Fly   572 RYLRVADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAE----GGLIAKWLKDAIE 632

  Fly   838 ---DEALAKCDKPEDQSDGISIQNIGGVFIVIFVGIGMACITLVFEYWWYRY--RKNP 890
               .||||:      |...::||.....|:.:.:|..::.:||:.|.|.:::  .|:|
  Fly   633 HLPAEALAQ------QEALMNIQKFWSSFVALLIGYVISMLTLLAERWHFKHIVMKHP 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 11/43 (26%)
PBP2_iGluR_putative 438..836 CDD:270435 78/458 (17%)
Lig_chan 565..870 CDD:278489 62/347 (18%)
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 53/284 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462730
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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