DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and Ir64a

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_647962.1 Gene:Ir64a / 38616 FlyBaseID:FBgn0035604 Length:859 Species:Drosophila melanogaster


Alignment Length:703 Identity:129/703 - (18%)
Similarity:230/703 - (32%) Gaps:229/703 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 QIEKLRNLDINNFFILGTLQSIRMVLESVKPAYFER-------NFAWHAITQNEGEISSQRDNAT 279
            ::|.||.:.:.: ...|.:....:.|.|.|..|.|:       :||||..||. .|.|.:||:..
  Fly   148 RMEALRQIAVVD-LACGAVSRRFLELASAKMLYSEKFHWLLIEDFAWHGRTQT-AEGSGKRDDGE 210

  Fly   280 IMFMKPMAYTQYRDRLGLLRTTYNLNEEPQLSSAFYF----DLALRSFLTIKEMLQSGA------ 334
            :...:|....        ::.|    ::..|.|...|    :|.:.:.||:.:.:...|      
  Fly   211 MEEEEPPGQQ--------IQAT----DDEDLPSIESFLGGMNLYMNTELTLAKRMSEAAHYTLFD 263

  Fly   335 -WPKDMEY---LNCDDFQGGNTPQRNLDLRDYFTKITEPTSYGTFDLVTQSTQPFNGHSFMKFEM 395
             |...:.|   :|..:. |..||...:.|..:|.              |.||        ::..|
  Fly   264 VWNPGLNYGGHVNLTEI-GSFTPTEGIQLHTWFR--------------TTST--------VRRRM 305

  Fly   396 DINVLQIRGGSSVNSKSIGKWISGLNSELIVKDEEQMKNLTADTVYRIFTVVQAPFIMRDETAPK 460
            |:...::|                  ..::|.:    ||:|...:|.:...:             
  Fly   306 DMQHARVR------------------CMVVVTN----KNMTGTLMYYLTHTM------------- 335

  Fly   461 GYKGYCIDLINE------IAAIVHFDYTIQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSM 519
              .|: ||.:|.      :|....|::|........:|.: :||:::|::..|:..:.|||...:
  Fly   336 --SGH-IDTMNRFNFNLLMAVRDMFNWTFVLSRTTSWGYV-KNGRFDGMIGALIRNETDIGGAPI 396

  Fly   520 SVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLCILAAYFFTSFLMWIFD 584
            ....||...||.....:......|.....|:......||.....:||:.|:.....|.|::|...
  Fly   397 FYWLERHKWIDVAGRSWSSRPCFIFRHPRSTQKDRIVFLQPFTNDVWILIVGCGVLTVFILWFLT 461

  Fly   585 --RW----------------SP----YSYQNNRE-----------------KYKDDEEKREFN-- 608
              .|                :|    |..|..:|                 |.|.:|::.|:.  
  Fly   462 TIEWKLVPHDGSALIKPKGGAPPRHHYQQQQQQEQVEAPVRPITAVSVVVSKEKVEEKQEEYEDS 526

  Fly   609 ------------------------------------LKECLWFCMTSLTPQGGGEAPKNLSGRLV 637
                                                ..|.:.|.:..:..||.|.:...:|||.:
  Fly   527 TPIDAGTLWQRCYQKLNKYIKDRKAKQKKAPERVGLFLESVLFFVGIICQQGLGFSTSFVSGRCI 591

  Fly   638 AATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMTYFERMSNIE 702
            ..|..||.|.|...|:|::...|.:.:..| :::|.||..           ||.....|.:....
  Fly   592 VITSLLFSFCIYQFYSASIVGTLLMEKPKT-IKTLSDLVH-----------SSLKVGMEDILYNR 644

  Fly   703 QMFYEIWKDLSLN---DSLTAVERSKLAVWD-------YPVSDKYTKMWQAMQEAKLPATLDEAV 757
            ..|......:|:.   ..:|:|..:|....|       .|||....|.::.:..:      .|..
  Fly   645 DYFLHTKDPVSMELYAKKITSVPTTKENEADEDEPVDPNPVSTDPAKSYRDIVHS------HETG 703

  Fly   758 ARVRNSTAAT------------GFAFLGDATDIRYLQLTNCDLQVVGEEFSRK 798
            |..:::.|:.            ||||..|..         ...:::.|.||.:
  Fly   704 AHAKDNAASNWLDPETGLLRHLGFAFHVDVA---------AAYKIIAETFSEQ 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606 42/216 (19%)
PBP2_iGluR_putative 438..836 CDD:270435 83/466 (18%)
Ir64aNP_647962.1 Periplasmic_Binding_Protein_Type_2 351..>465 CDD:473866 25/114 (22%)
Lig_chan 563..828 CDD:459656 44/212 (21%)

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