DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and Ir60a

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_611901.1 Gene:Ir60a / 37881 FlyBaseID:FBgn0034994 Length:716 Species:Drosophila melanogaster


Alignment Length:743 Identity:139/743 - (18%)
Similarity:264/743 - (35%) Gaps:212/743 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 LESVKPAYFERN------FAWHAITQNEGEISSQRDNATIMFMKPM--AYTQ----YRDRLGLLR 299
            |:|....:|.||      .|::.:..:...:||..|.....|.|.:  |.|.    .|:.|..:|
  Fly    56 LDSFAQIFFFRNPKERFTRAYNLMLVHAFHLSSPADQIQEGFSKLINEAVTNPGPPDREELFQMR 120

  Fly   300 --TTYNL----NEEPQLSSAFYFDLALRSFLTIKEML-----QSGAWPKDMEYLNCDDFQGGNTP 353
              :.||:    .::.:|..|..:.:.:.|...:||::     :..:|.....:|..  |......
  Fly   121 VASDYNITNGTEDKGELILADNYVIVVDSVDRLKELMKKKIVEMRSWNPGARFLVL--FHNATCR 183

  Fly   354 QRNLDLRDYFTKITEPTSYGTFDLVTQSTQPFNGHS----FMKFEMDINVLQIRGGSSVNSK--- 411
            .|.|.:.....|          ||:    :.|..|.    :....|:.|:|.....|:||.:   
  Fly   184 NRPLGVASNIFK----------DLM----EMFYVHRVALLYANSTMNYNLLVNDYYSNVNCRILN 234

  Fly   412 --SIGKWISG--LNSELIVKDEEQ-------MKNLTADTVYRIFTVVQAPFIMRDETAPKGYKGY 465
              |:|:...|  ..:..:||...|       .:|.|    :...:.:.|||:..|          
  Fly   235 VQSVGQCHDGKLYPNNAVVKASMQDYVSGFSPRNCT----FFACSSISAPFVEAD---------- 285

  Fly   466 CI-----DLINEIAAIVHFDYTIQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAER 525
            ||     .::..:...:.||.. |.......|.||....|.|::.|:.:.:.|...|  ....:.
  Fly   286 CILGLEMRILGFMKNRLKFDVN-QTCSLESRGEMDGPANWTGLLGKVQNNECDFVFG--GYYPDN 347

  Fly   526 EIVIDF---------TVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLCILAAYFFTSFLMW 581
            |:...|         ...:|    |.:..:||:..:    .:.:.|...|:    .:.....:.|
  Fly   348 EVADHFWGSDTYLQDAHTWY----IKMADRRPAWQA----LVGIFEAYTWI----GFILILIISW 400

  Fly   582 IFDRW--------SPYSYQNNREKYKDDEEKREFNLKECLWFCMT-SLTPQGGGEAPKNLSGRLV 637
            :|  |        .|..||             :.:|.......:| |:..|   |.|...:.||.
  Fly   401 LF--WFTLVMILPEPKYYQ-------------QLSLTAINALAVTISIAVQ---ERPICETTRLF 447

  Fly   638 AATWWLFGFIIIASYTANLAAFLTVSRLDTP--VESLDDLAKQYKILYA--PLNG-SSAMTYFER 697
            .....|:|..::|:||:.:     ::....|  :..||:|.   :::.|  |..| ..:..:|| 
  Fly   448 FMALTLYGLNVVATYTSKM-----IATFQDPGYLHQLDELT---EVVAAGIPFGGHEESRDWFE- 503

  Fly   698 MSNIEQMF----YEIWKD-LSLNDSLTAVERSKLAVWDYPVSDK-YTKMWQAMQEAKLPATLDEA 756
              |.:.|:    |.|..: :..:.:|.||:..:..:    :|:: ||          :.:.|.:.
  Fly   504 --NDDDMWIFNGYNISPEFIPQSKNLEAVKWGQRCI----LSNRMYT----------MQSPLADV 552

  Fly   757 VARVRNSTAAT--------GFAFLGDATDIRYLQLTNCDLQVVGEEFSRKPYAIAVQQGSHLKDQ 813
            :....|:..::        ||.||.:...|..|.......|.:..:|                 :
  Fly   553 IYAFPNNVFSSPVQMIMKAGFPFLFEMNSIIRLMRDVGIFQKIDADF-----------------R 600

  Fly   814 FNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGI--SIQNIGGVFIVIFVGIGMACIT 876
            :||..|..:||.                    :|:.....|  :.:::.|.|.::.||...|.:|
  Fly   601 YNNTYLNRINKM--------------------RPQFPETAIVLTTEHLKGPFFILVVGSCWAALT 645

  Fly   877 LVFEYWWYRYRKNPRIIDVAEANAERSN 904
            .:.|...:|:|  .:::..:|....||:
  Fly   646 FIGELIIHRWR--TQLVSTSEQQDRRSD 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606 41/202 (20%)
PBP2_iGluR_putative 438..836 CDD:270435 78/439 (18%)
Ir60aNP_611901.1 None

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