DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and spp-22

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001025004.2 Gene:spp-22 / 3565459 WormBaseID:WBGene00044283 Length:149 Species:Caenorhabditis elegans


Alignment Length:107 Identity:24/107 - (22%)
Similarity:44/107 - (41%) Gaps:17/107 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 NSKSIGKWISGLNSELIVKDEEQMKNLTADTVYRIFTVVQAPFIMRDETAPKGYKGYCIDLINE- 472
            |:|.:.|......:|..|:...||..::.|...|....|...||...:...:..:..|..|.:| 
 Worm    26 NAKDLEKDRMLTTNEYYVEKVNQMAGISCDLCMRAVYGVNYDFIQLKKDFIEMIRLDCEALFHER 90

  Fly   473 ---IAAIVHFDYTIQEVEDGKFGNMDENGQWNGIVKKLMDKQ 511
               |:..:.|..|  :||           :::|.|:|::|.:
 Worm    91 PEDISECIRFLTT--KVE-----------KYSGKVEKILDSR 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 4/16 (25%)
PBP2_iGluR_putative 438..836 CDD:270435 17/78 (22%)
Lig_chan 565..870 CDD:278489
spp-22NP_001025004.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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