DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and GRIN2B

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_000825.2 Gene:GRIN2B / 2904 HGNCID:4586 Length:1484 Species:Homo sapiens


Alignment Length:1001 Identity:226/1001 - (22%)
Similarity:383/1001 - (38%) Gaps:271/1001 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MNPKT---SKILWL-LGFLSLLSSFSLEIAAQTTQNINVLFINEVDNEPAAKAVEVVLTYLKKNI 64
            |.|:.   |...|| |..|::..|.:....:..:..|.|:.:...| |.|.|...      :|:.
Human     1 MKPRAECCSPKFWLVLAVLAVSGSRARSQKSPPSIGIAVILVGTSD-EVAIKDAH------EKDD 58

  Fly    65 RYGLSV--QLDSIEANKSDAKVLLEAICNKYATSIEKKQTPHLILDTTKSGIASETVKSFTQALG 127
            .:.|||  :::.:..|::|.|.::..||:  ..|..|.|......||.:..||.  :..|..|..
Human    59 FHHLSVVPRVELVAMNETDPKSIITRICD--LMSDRKIQGVVFADDTDQEAIAQ--ILDFISAQT 119

  Fly   128 LPTISASYGQQGDLRQWRDLDEAKQKY------------LLQVMPPADIIPEAIRSIVIHMNITN 180
            |..|...:|  |......|.||:...:            :|.:|...|..   |.|||     |.
Human   120 LTPILGIHG--GSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWY---IFSIV-----TT 174

  Fly   181 AAILYDDSFVMDHKYKSLLQN------IQTRHVITAIAKDGKREREEQIEKLRNLDINNFFILGT 239
            ....|.| ||  :|.:|.::|      ::...::.....||..:.:.|::||::..|..:.....
Human   175 YFPGYQD-FV--NKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEE 236

  Fly   240 LQSIRMVLESVKPAYFERNFAWHAITQNEGEISSQRDNATIMFMKP-----MAYTQY-------- 291
            ...|..|..||....:  .:.|...:...|      |..|:....|     ::|.::        
Human   237 ATYIFEVANSVGLTGY--GYTWIVPSLVAG------DTDTVPAEFPTGLISVSYDEWDYGLPARV 293

  Fly   292 RDRLGLLRTTYNLNEEPQLSSAFYFDLALRSFLTIKEMLQSGAW---PKDMEYLNCDDFQGGNTP 353
            ||.:.::.|                        ...:||...::   ||...|         ||.
Human   294 RDGIAIITT------------------------AASDMLSEHSFIPEPKSSCY---------NTH 325

  Fly   354 QRNL----DLRDYFTKITEPTSYGTFDLVTQSTQPFNGH--SFMK--FEMDINVLQIRGGSSVNS 410
            ::.:    .|..|...:|                 |.|.  ||.:  ::|...::.|........
Human   326 EKRIYQSNMLNRYLINVT-----------------FEGRNLSFSEDGYQMHPKLVIILLNKERKW 373

  Fly   411 KSIGKWISGLNSELIVKDEE-QMKNLT-----------ADTVYRIFTVVQAPFIMRDETAP---- 459
            :.:|||          ||:. |||...           .|....|.|:.:|||::.:...|    
Human   374 ERVGKW----------KDKSLQMKYYVWPRMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGT 428

  Fly   460 ---------------------KGY-----KGYCIDLINEIAAIVHFDYTIQEVEDGKFGNMDENG 498
                                 .||     ||:|||::.:|:..|.|.|.:..|.:||.|. ..||
Human   429 CMRNTVPCQKRIVTENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGK-KING 492

  Fly   499 QWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVLET 563
            .|||::.:::.|:|.:.:||:::..||..|:||:||:.: .||::|:.|.:...|...||.....
Human   493 TWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIE-TGISVMVSRSNGTVSPSAFLEPFSA 556

  Fly   564 NVWLCILAAYFFTSFL-MWIFDRWSPYSYQNNREKYKDDEEK--REFNLKECLWFCM-----TSL 620
            :||:.:.......|.: :::|:.:||..|  || ...|..|.  ..|.:.:.:|...     .|:
Human   557 DVWVMMFVMLLIVSAVAVFVFEYFSPVGY--NR-CLADGREPGGPSFTIGKAIWLLWGLVFNNSV 618

  Fly   621 TPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAP 685
            ..|.    ||..:.:::.:.|..|..|.:||||||||||:........|..|.|...|....::|
Human   619 PVQN----PKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSP 679

  Fly   686 -------LNGSSAMTYFERMSNIEQMFYEI------WKDLSLNDSLTAVERSKLAVWDYPVSDKY 737
                   .|||:     ||  ||...:.|:      :....::|:|.:::..||.          
Human   680 PFRFGTVPNGST-----ER--NIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLD---------- 727

  Fly   738 TKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDIRYL--QLTNCDLQVV--GEEFSRK 798
                                            ||:.||..:.|:  :...|.|..:  |:.|:..
Human   728 --------------------------------AFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST 760

  Fly   799 PYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGISIQNIGGVF 863
            .|.||:|:.|..|.|.:.|||.|....::|:|:..|.   ..:...:|.|..|..:.|.|:.|||
Human   761 GYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWL---TGICHNEKNEVMSSQLDIDNMAGVF 822

  Fly   864 IVIFVGIGMACITLVFE---YWWYRY 886
            .::...:.::.||.:.|   ||.:|:
Human   823 YMLGAAMALSLITFICEHLFYWQFRH 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606 83/424 (20%)
PBP2_iGluR_putative 438..836 CDD:270435 115/452 (25%)
GRIN2BNP_000825.2 PBP1_iGluR_NMDA_NR2 33..388 CDD:380601 88/446 (20%)
PBP2_iGluR_NMDA_Nr2 403..803 CDD:270436 115/460 (25%)
Pore-forming. /evidence=ECO:0000250|UniProtKB:A7XY94 604..623 3/22 (14%)
NMDAR2_C 840..1484 CDD:463148 3/9 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1074..1097
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1161..1194
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1271..1301
Interaction with DAPK1. /evidence=ECO:0000250|UniProtKB:Q01097 1292..1304
PDZ-binding. /evidence=ECO:0000250 1482..1484
Blue background indicates that the domain is not in the aligned region.

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