DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and GRIN2A

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:991 Identity:203/991 - (20%)
Similarity:368/991 - (37%) Gaps:290/991 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LSVQLDSIEANKSDAKVLLEAICNKYATSIEKKQTPHLIL--DTTKSGIAS--ETVKS--FTQAL 126
            |.|.:.::..|::|.|.|:..:|:..:.:    :...|:.  ||.:..:|.  :.:.|  |...|
Human   117 LDVNVVALLMNRTDPKSLITHVCDLMSGA----RIHGLVFGDDTDQEAVAQMLDFISSHTFVPIL 177

  Fly   127 GL------------PT-----ISASYGQQGDLRQWRDLDEAKQKYLLQVMPPAD---------II 165
            |:            ||     ..||..||..:             :|::|...|         |.
Human   178 GIHGGASMIMADKDPTSTFFQFGASIQQQATV-------------MLKIMQDYDWHVFSLVTTIF 229

  Fly   166 PEAIRSIV--IHMNITNAAILYD-------DSFVMDHKYKSLLQNIQTRHVITAIAKDGKREREE 221
            | ..|..:  :...:.|:.:.:|       |:...|.|.:..|:.|.:..::...:||   |...
Human   230 P-GYREFISFVKTTVDNSFVGWDMQNVITLDTSFEDAKTQVQLKKIHSSVILLYCSKD---EAVL 290

  Fly   222 QIEKLRNLDINNFFILGTLQSIRMVLESVKPAYFERNFAWHAITQNEGEISSQRDNATIMFMKPM 286
            .:.:.|:|.:..:.....:.|:......:.|..|.....  :::.::.:.|.:            
Human   291 ILSEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGLI--SVSYDDWDYSLE------------ 341

  Fly   287 AYTQYRDRLGLLRTT------------------YNLNEEPQLSSAFYFDLALRSFLTIKEMLQSG 333
              .:.||.:|:|.|.                  |...|.|::           ...|:...:.:.
Human   342 --ARVRDGIGILTTAASSMLEKFSYIPEAKASCYGQMERPEV-----------PMHTLHPFMVNV 393

  Fly   334 AWP-KDMEYLNCDDFQGGNTPQRNLDLRDYFTKITEPTSYGTFDLVTQSTQPFNGHSFMKFEMDI 397
            .|. ||:.:                            |..|                   :::..
Human   394 TWDGKDLSF----------------------------TEEG-------------------YQVHP 411

  Fly   398 NVLQIRGGSSVNSKSIGKWISGLNSELIVKDE--EQMKNLT----ADTVYRIFTVVQAPFIMRDE 456
            .::.|........:.:|||   .|..|.::..  .:.|:.:    .|....|.|:.:|||::.::
Human   412 RLVVIVLNKDREWEKVGKW---ENHTLSLRHAVWPRYKSFSDCEPDDNHLSIVTLEEAPFVIVED 473

  Fly   457 TAP-----------------------------KGYKGYCIDLINEIAAIVHFDYTIQEVEDGKFG 492
            ..|                             |..||:|||::.:::..|.|.|.:..|.:||.|
Human   474 IDPLTETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHG 538

  Fly   493 NMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKF 557
            . ..|..|||::.:::.::|.:.:||:::..||..|:||:||:.: .||::|:.|.:...|...|
Human   539 K-KVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVE-TGISVMVSRSNGTVSPSAF 601

  Fly   558 LTVLETNVWLCILAAYFFTSFL-MWIFDRWSPYSYQNNREKYKDDEEKREFNLKECLWFCM---- 617
            |.....:||:.:.......|.: :::|:.:||..|..|..|.|..... .|.:.:.:|...    
Human   602 LEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGP-SFTIGKAIWLLWGLVF 665

  Fly   618 -TSLTPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKI 681
             .|:..|.    ||..:.:::.:.|..|..|.:||||||||||:........|..|.|...|...
Human   666 NNSVPVQN----PKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDKKFQRPH 726

  Fly   682 LYAP-------LNGSSAMTYFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSDKY-T 738
            .|:|       .|||:     ||  ||..                          :||...:| |
Human   727 DYSPPFRFGTVPNGST-----ER--NIRN--------------------------NYPYMHQYMT 758

  Fly   739 KMWQAMQEAKLPATLDEAVARVRNSTAATG--FAFLGDATDIRYL--QLTNCDLQVVGEE--FSR 797
            |..|        ..:::|:..::     ||  .||:.||..:.|.  :...|.|..:|..  |:.
Human   759 KFNQ--------KGVEDALVSLK-----TGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFAT 810

  Fly   798 KPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGISIQNIGGV 862
            ..|.||:|:||..|.|.:.|:|..:...::|:|:..|.   ..:...:|.|..|..:.|.|:.||
Human   811 TGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWL---TGICHNEKNEVMSSQLDIDNMAGV 872

  Fly   863 FIVIFVGIGMACITLVFE---YWWYRYRKNPRIIDVAEANAERSNAADHPGKLVD---GVILGHS 921
            |.::...:.::.||.::|   ||..|:             ......:|.||.|..   |:.....
Human   873 FYMLAAAMALSLITFIWEHLFYWKLRF-------------CFTGVCSDRPGLLFSISRGIYSCIH 924

  Fly   922 GEKFEKSKAALRPRFN 937
            |...|:.|.:  |.||
Human   925 GVHIEEKKKS--PDFN 938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 63/417 (15%)
PBP2_iGluR_putative 438..836 CDD:270435 114/446 (26%)
Lig_chan 565..870 CDD:278489 81/324 (25%)
GRIN2AXP_016878661.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156047
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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