DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and GRIK3

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:922 Identity:247/922 - (26%)
Similarity:399/922 - (43%) Gaps:207/922 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LTYLKKNIRYGLSVQLDSIEANKSDAKVLLEAICNKYATSIEKKQTPHLILDTTKSGIASETVKS 121
            |||..:.|.:.     ||.||.|.        .|::.|..:       :.:.....|..:..|:|
Human    79 LTYDIQRIHFH-----DSFEATKK--------ACDQLALGV-------VAIFGPSQGSCTNAVQS 123

  Fly   122 FTQALGLPTISASYGQQGDLRQWR--DLDEAKQKYLLQVMPPADIIPEAIRSIVIHMNITNAAIL 184
            ...||.:|.|..         :|:  .||. |..:.:.:.|....:..||..:|.::...:|.::
Human   124 ICNALEVPHIQL---------RWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQYLKWRSATVV 178

  Fly   185 YDDSFVMDHKYKSLLQNIQTRHVITAIAKDGKREREEQIEKLRNLDINNFFILGTLQSIRMVLES 249
            ||||..:          |:.:.:|.|.::...|      .|:|.|.|::       ...|.:|:.
Human   179 YDDSTGL----------IRLQELIMAPSRYNIR------LKIRQLPIDS-------DDSRPLLKE 220

  Fly   250 VKPAYFERNFAWHAITQNEGEISSQRDNATIMFMKPMAYTQYRDRLGLLRTT---YNLNEEPQLS 311
            :|     |...:..|......:::|      :..:.||.....:....:.||   |.|:.||.. 
Human   221 MK-----RGREFRIIFDCSHTMAAQ------ILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYR- 273

  Fly   312 SAFYFDLALRSF--LTIKEMLQSGAWPK-DMEYLNCDDFQGGNTPQRNLDLRDYFTKITEPTSYG 373
               |..:.|..|  |.:.....|....| .||.|..       .|:....|.|..........|.
Human   274 ---YSGVNLTGFRILNVDNPHVSAIVEKWSMERLQA-------APRSESGLLDGVMMTDAALLYD 328

  Fly   374 TFDLVTQSTQ----------------------------------------PFNGHSFMKFEMDIN 398
            ...:|:...|                                        .||..|.::.:.|::
Human   329 AVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLD 393

  Fly   399 VLQIRGGSSVNSKSIGKW--ISGLNSELIVKDEEQMKNLTADTVYR---IFTVVQAPFIM---RD 455
            ::.::   ....:.:|.|  ..|||...:.|.  :..|:|.....|   :.||::.||:|   .|
Human   394 IISLK---EDGLEKVGVWSPADGLNIT
EVAKG--RGPNVTDSLTNRSLIVTTVLEEPFVMFRKSD 453

  Fly   456 ET--APKGYKGYCIDLINEIAAIVHFDYTIQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGS 518
            .|  ....::||||||:.|:|.|:.|.|.|:.|||||:|..|:.|||||:||:|:|.:||:.:..
Human   454 RTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAP 518

  Fly   519 MSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPS-SLFKFLTVLETNVWLCILAAYFFTSFLMWI 582
            :::...||..|||:.|:..| |::|:.::|:..: |:|.||..|..::|:.:|.||...|.::::
Human   519 LTITHVREKAIDFSKPFMTL-GVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582

  Fly   583 FDRWSPYSYQNNREKYKDDE-EKREFNLKECLWFCMTSLTPQGGGEAPKNLSGRLVAATWWLFGF 646
            ..|:|||.:.:........| .:..|.|....||.|.||..||....||.||.|::...||.|..
Human   583 IARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTL 647

  Fly   647 IIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMTYFERMSNIEQMFYEIWKD 711
            |||:||||||||||||.|:::|::|.||||||.||.|..:...:.||:|                
Human   648 IIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFF---------------- 696

  Fly   712 LSLNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAKLPATL----DEAVARVRNSTAATGFAFL 772
                      ::||::.::        |||..|  :..|:.|    :|.:.|    .....:|.|
Human   697 ----------KKSKISTFE--------KMWAFM--SSKPSALVKNNEEGIQR----ALTADYALL 737

  Fly   773 GDATDIRYLQLTNCDLQVVGEEFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKN 837
            .::|.|.|:...||:|..:|.....|.|.|....||..:|:...|||.|..:.:|..:|||||:.
Human   738 MESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIMKEKWWRG 802

  Fly   838 DEALAKCDKPED-QSDGISIQNIGGVFIVIFVGIGMACITLVFEYWWYRYRKNPRIIDVAEANAE 901
                :.|.:.|: ::..:.||.|||:|||:..|:.::.:..|.|: .|:.||          .||
Human   803 ----SGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEF-VYKLRK----------TAE 852

  Fly   902 R------SNAAD 907
            |      |..||
Human   853 REQRSFCSTVAD 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606 74/410 (18%)
PBP2_iGluR_putative 438..836 CDD:270435 144/411 (35%)
GRIK3NP_000822.2 PBP1_iGluR_Kainate 37..417 CDD:380605 77/415 (19%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 144/408 (35%)

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