DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and T25E4.2

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001364710.1 Gene:T25E4.2 / 188897 WormBaseID:WBGene00020804 Length:455 Species:Caenorhabditis elegans


Alignment Length:447 Identity:97/447 - (21%)
Similarity:160/447 - (35%) Gaps:116/447 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 LINEIAAIVHFDYTIQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTV 533
            |:|..|.||..|..|::..|     |..||            .|||.|.|.....:|...:|||.
 Worm    47 LMNSTATIVQIDADIEQSID-----MVSNG------------SADITLVSARQTLDRMKKVDFTT 94

  Fly   534 P----YY--------DLVGITIMMQRPSSPSSLFKFLTVLETNVWLCILAA--YFFTSFLMWIFD 584
            |    ||        :|.....:|:       ||.:.|:.....:..|:.|  |.:|    |||.
 Worm    95 PIGFVYYGYLVREIPELAVADYIMR-------LFDYDTLAILISFGLIIGALLYLYT----WIFG 148

  Fly   585 RWSPYSYQNNREKYKDDEEKREFNLKECLWFCMTSLTPQGGGEAPKNLSGRLVAATWWLFGFIII 649
                               .|..:|.:.::...:.:..|........:...::...|.|...:||
 Worm   149 -------------------LRVRSLLDWMFISCSGIIHQFMFRISSPICALVLIGFWLLCCLVII 194

  Fly   650 ASYTANLAAFLTVS-RLDTPVESLDDL--AKQYKILYAPLNGSSAMTYFERMSNIEQMFYEIWKD 711
            ..|.|.|.:||.:| ...|...:||.:  |.::|       |.:.:        |::..|..:  
 Worm   195 TYYEAKLKSFLLLSHHRGTIFNTLDGVLEAAEHK-------GWTLV--------IQERGYTPY-- 242

  Fly   712 LSLNDSLTA-VERSKLAVWDYPVSDKYTKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGD- 774
            |..|.|..| ::|.|..:          ....|..:|.|....|:.|          ||:.|.. 
 Worm   243 LYCNPSQCARLDRLKSRI----------NFIGADDDANLLLGQDKHV----------GFSALASD 287

  Fly   775 --ATDIRYLQLTNCDLQVVGEEFSRKPYAIAVQQG-SHLKDQFNNAILTLLNKRQLEKLKEKWWK 836
              .|||.|....:..|.|..:..:.:..|.||.:. ..|:::||.|:  ...|.....::.::  
 Worm   288 LAETDITYFDYHSKILFVRDKIMAPEYLAYAVNKNVKGLREKFNRAV--AYTKSGYGTVRSRY-- 348

  Fly   837 NDEALAKCDKPEDQSDGISIQNIGGVFIVI----FVGIGMACITLVFEYWWYRYRKN 889
             ..:....:....||..|::..... ||.:    |:..|:|.|..:.|..::|..||
 Worm   349 -IASFPSYNSVTSQSQTITVLQTSH-FIQLYKFCFIFYGIAIIVFILEIIFHRMTKN 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378
PBP2_iGluR_putative 438..836 CDD:270435 84/388 (22%)
Lig_chan 565..870 CDD:278489 62/318 (19%)
T25E4.2NP_001364710.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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