DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and F59E12.8

DIOPT Version :9

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001364714.1 Gene:F59E12.8 / 186629 WormBaseID:WBGene00019123 Length:379 Species:Caenorhabditis elegans


Alignment Length:416 Identity:79/416 - (18%)
Similarity:139/416 - (33%) Gaps:126/416 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   513 DIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLCILAAYFFTS 577
            |:..|...:.|:|..|:.||.|....|....::..|.....:........|.|||.:.......:
 Worm    11 DMACGRFRMTADRANVLTFTYPTQFEVNQVYLITDPQKSVDVVFLFHPFSTTVWLLLSLTVLVVA 75

  Fly   578 FLMWIFDRWSPYSYQNNREKYKDDEEKRE-------------FNL-----KECLWFCMTSLTPQG 624
            .:.:|. |:..:      :..|:.|...|             |||     |:..:|..       
 Worm    76 IVFFIL-RFVEF------KSTKETESSYECIQNSIFQVLLSTFNLEIRVAKKSTFFAF------- 126

  Fly   625 GGEAPKNLSGRLVAATWWLFGF-IIIASYTANLAAFLTVS-RLDTPVES----LDDLAKQYKILY 683
                      .|.:..|.|..| :.|..||:.|:..:.|| :...|.::    :|.|.|....|:
 Worm   127 ----------HLFSTIWLLAWFHVFIDFYTSELSGMMVVSDKRQVPFDNFYGFIDHLRKGNYRLF 181

  Fly   684 APLNGSSAMTYFERM---------SNIEQMFYEI-------WKDL-SLNDSLTAVERSKLAV--- 728
            .|    ||    :|:         |....:|.||       :.|| .|||. ..|...|:.:   
 Worm   182 TP----SA----DRIPECPHEITTSKCNAIFSEILSKHPPEYGDLMQLNDR-EFVSSRKIPLVGF 237

  Fly   729 -WDYP---VSDKYTKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDIRYLQLTNCDLQ 789
             | ||   :|.|:: :|..                                      :|.:.|:.
 Worm   238 GW-YPAQRISSKFS-IWTQ--------------------------------------ELFHSDIW 262

  Fly   790 VVGEEFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGI 854
            :: .:|...|.|..|:......|:.|..|:.:|  ....::...:......|....||...|  .
 Worm   263 LI-RDFPVCPAAYIVRPTFPYLDELNEMIIKVL--PAFSRIDNHYTPAYPELTLTGKPSKSS--F 322

  Fly   855 SIQNIGGVFIVIFVGIGMACITLVFE 880
            |:..:..:|::..:|..::.:.|:.|
 Worm   323 SLNQLSSIFLIHLLGAFVSTLFLIAE 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378
PBP2_iGluR_putative 438..836 CDD:270435 70/370 (19%)
Lig_chan 565..870 CDD:278489 65/352 (18%)
F59E12.8NP_001364714.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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