DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and F59E12.8

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001364714.1 Gene:F59E12.8 / 186629 WormBaseID:WBGene00019123 Length:379 Species:Caenorhabditis elegans


Alignment Length:416 Identity:79/416 - (18%)
Similarity:139/416 - (33%) Gaps:126/416 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   513 DIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLCILAAYFFTS 577
            |:..|...:.|:|..|:.||.|....|....::..|.....:........|.|||.:.......:
 Worm    11 DMACGRFRMTADRANVLTFTYPTQFEVNQVYLITDPQKSVDVVFLFHPFSTTVWLLLSLTVLVVA 75

  Fly   578 FLMWIFDRWSPYSYQNNREKYKDDEEKRE-------------FNL-----KECLWFCMTSLTPQG 624
            .:.:|. |:..:      :..|:.|...|             |||     |:..:|..       
 Worm    76 IVFFIL-RFVEF------KSTKETESSYECIQNSIFQVLLSTFNLEIRVAKKSTFFAF------- 126

  Fly   625 GGEAPKNLSGRLVAATWWLFGF-IIIASYTANLAAFLTVS-RLDTPVES----LDDLAKQYKILY 683
                      .|.:..|.|..| :.|..||:.|:..:.|| :...|.::    :|.|.|....|:
 Worm   127 ----------HLFSTIWLLAWFHVFIDFYTSELSGMMVVSDKRQVPFDNFYGFIDHLRKGNYRLF 181

  Fly   684 APLNGSSAMTYFERM---------SNIEQMFYEI-------WKDL-SLNDSLTAVERSKLAV--- 728
            .|    ||    :|:         |....:|.||       :.|| .|||. ..|...|:.:   
 Worm   182 TP----SA----DRIPECPHEITTSKCNAIFSEILSKHPPEYGDLMQLNDR-EFVSSRKIPLVGF 237

  Fly   729 -WDYP---VSDKYTKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDIRYLQLTNCDLQ 789
             | ||   :|.|:: :|..                                      :|.:.|:.
 Worm   238 GW-YPAQRISSKFS-IWTQ--------------------------------------ELFHSDIW 262

  Fly   790 VVGEEFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGI 854
            :: .:|...|.|..|:......|:.|..|:.:|  ....::...:......|....||...|  .
 Worm   263 LI-RDFPVCPAAYIVRPTFPYLDELNEMIIKVL--PAFSRIDNHYTPAYPELTLTGKPSKSS--F 322

  Fly   855 SIQNIGGVFIVIFVGIGMACITLVFE 880
            |:..:..:|::..:|..::.:.|:.|
 Worm   323 SLNQLSSIFLIHLLGAFVSTLFLIAE 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606
PBP2_iGluR_putative 438..836 CDD:270435 70/370 (19%)
F59E12.8NP_001364714.1 None
Blue background indicates that the domain is not in the aligned region.

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