DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and glr-7

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001337310.1 Gene:glr-7 / 180547 WormBaseID:WBGene00001618 Length:885 Species:Caenorhabditis elegans


Alignment Length:909 Identity:383/909 - (42%)
Similarity:538/909 - (59%) Gaps:99/909 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VQLDSIEANKSDAKVLLEAICNKYATSIEKKQTPHLILDTTKSGIASETVKSFTQALGLPTISAS 134
            :.|:..:.|.|..   :.::|::..       ....::...:|..:...|....:...:|||   
 Worm    12 ISLERYDFNDSSD---INSLCDQMV-------NVSFVISVCRSNDSISLVAELARISQVPTI--- 63

  Fly   135 YGQQGDLRQWR-DLD--------EAKQKYLLQVMPPADIIPEAIRSIVIHMNIT-NAAILYDDSF 189
               |.||..|. .|:        .:...|...|:... :....|..|...:||| |:.:|||:.:
 Worm    64 ---QVDLNYWSLPLNFNGTSVPTISSPSYTTMVLSTL-VFQNVITDIFADLNITPNSTVLYDNMY 124

  Fly   190 VMD----HKYKSLLQNIQTRHVITAIAKDGKREREEQIEKLRNLDINNFFILGTLQSI-RMVLES 249
            ..|    ....|:|..|:...:.|.:.:     ...||.:||...||:..::...::: |..||:
 Worm   125 PPDFTAWRDAFSVLPGIRFVPMETTVLR-----MRAQITQLRMASINSLILVAKTENVERFTLEA 184

  Fly   250 VKPAYF--ERNFAWHAITQNEGEISSQRDNATIMF-MKPMAYTQ-----------YRDRLGLLRT 300
               |.|  :|.|..:.:|::..........:..|| ::|....:           :|:.:| |..
 Worm   185 ---ADFIEQRVFNTYVLTKDITAFKCDSCESAFMFWLRPFPVGKLMEIRDLDDYLFRNEIG-LEL 245

  Fly   301 TYNLNEEPQLSSAFYFDLALRSFLTIKEMLQSGAWPKDMEYLNCDDFQGGNTPQRNLDLRDYFTK 365
            .|::|....|:.|||.::...:|.||:.|   .|....:....|.  .|.:.|.....:||..  
 Worm   246 DYSINGWDSLNVAFYMNVMGYAFETIRTM---NATFDVLPTFTCQ--TGPSEPNITTTVRDII-- 303

  Fly   366 ITEPT-SYGTFDLVTQSTQPFNGHSFMKFEMDINVLQIRGG----SSVNSKSIGKW--ISGLNSE 423
            :.:|. .||.:   |::     |.:....::::.:.:|...    .::.:|.:|.|  ||.| |.
 Worm   304 LNDPAHEYGNY---TEA-----GLNMFFQDVEVRIYKIDRDRDHEDALFNKEVGVWSPISKL-SV 359

  Fly   424 LIVKDEEQMKNLTADTVYRIFTVVQAPFIMRDETAPKGYKGYCIDLINEIAAIVHFDYTIQEVED 488
            :....:..::||   .::|:.|::|.||:.|.......|:||||||||.|...|:|.|||.||||
 Worm   360 MYGTLQVDVRNL---NIFRVVTLIQPPFVQRTGDPDTPYEGYCIDLINMIQVEVNFTYTIYEVED 421

  Fly   489 GKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSS 553
            |.||.||:||.|||::..|:...|||.|..:|||||||..:|||||||||||.||:|::.....|
 Worm   422 GSFGTMDDNGNWNGLIGALVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYS 486

  Fly   554 LFKFLTVLETNVWLCILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKECLWFCMT 618
            ||||:.|||..|||||:|||.|||.|:|||||:||||:.||:|:|::|.|||:|:||||||||||
 Worm   487 LFKFMKVLEWPVWLCIVAAYLFTSILLWIFDRFSPYSFTNNKERYQNDIEKRQFSLKECLWFCMT 551

  Fly   619 SLTPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILY 683
            |||||||||||||:|||||||||||||||||||||||||||||||||:.|:.|||||||||||.|
 Worm   552 SLTPQGGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSRLEQPISSLDDLAKQYKIEY 616

  Fly   684 APLNGSSAMTYFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAK 748
            ||:.||::.|||.||:.||:.||.:||::|||:|::..:|:||||||||||||:|.||:.|||:|
 Worm   617 APIKGSASETYFRRMAEIEETFYNMWKEMSLNESMSPRDRAKLAVWDYPVSDKFTNMWRYMQESK 681

  Fly   749 LPATLDEAVARVRNSTAATGFAFLGDATDIRYLQLTNCDLQVVGEEFSRKPYAIAVQQGSHLKDQ 813
            ||..:|.||.||.||  ..||||:||||:|:|..||||:||.||.||||||||||||.|..|||:
 Worm   682 LPVNMDTAVDRVLNS--VDGFAFIGDATEIKYAALTNCNLQQVGTEFSRKPYAIAVQSGHILKDK 744

  Fly   814 FNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGISIQNIGGVFIVIFVGIGMACITLV 878
            .::|||.|||:|:||.||||||.::.....|....|:||||||||||||||||..||.::.:||.
 Worm   745 ISSAILMLLNERRLETLKEKWWTDNPNKVSCPDSSDESDGISIQNIGGVFIVILAGIALSIVTLA 809

  Fly   879 FEYWWYRYR------KNPRIIDVAEA-----NAERSNAA--DHPGKLVDGVILGHSGEKFEKSK 929
            |||::|:.:      |....:::.::     |...:|..  |.| ||.:|.  ..:|..|.::|
 Worm   810 FEYYYYKRKARKAAEKEQEELEMKQSQQVVPNGFHTNGVKQDAP-KLTNGT--KTNGNTFRRTK 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606 75/383 (20%)
PBP2_iGluR_putative 438..836 CDD:270435 264/397 (66%)
glr-7NP_001337310.1 Periplasmic_Binding_Protein_type1 <101..>274 CDD:471960 43/181 (24%)
PBP2_iGluR_putative 373..767 CDD:270435 264/395 (67%)

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