DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir25a and si:ch211-264f5.8

DIOPT Version :10

Sequence 1:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster
Sequence 2:XP_017207885.1 Gene:si:ch211-264f5.8 / 100331381 ZFINID:ZDB-GENE-081104-209 Length:1063 Species:Danio rerio


Alignment Length:955 Identity:250/955 - (26%)
Similarity:402/955 - (42%) Gaps:231/955 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AQTTQNINVLFINEVDNEPAAKAVEVVLTYLKKNIRYGLSVQLDSI----------EANKSDAKV 84
            |...:|||.|.     ..||...|||.:..|:::.:|..:..:..|          .|:...:..
Zfish    57 ALARENINSLM-----EGPARARVEVDIFELQRDSQYETTDTMCQILPKGVVSVIGPASSPASGS 116

  Fly    85 LLEAICNKYATSIEKKQTPHLILDTTKS------GIASET-----------VKSFTQALGLPTIS 132
            .:..||.       :|:.||:.:...::      ..||.|           :.:..::.|.||.|
Zfish   117 TVSHICG-------EKEIPHIKIGPEETPRLPYLRFASVTLYPSNEDLSLAIGAILRSFGYPTAS 174

  Fly   133 ASYGQQGDLRQWRDLDEAKQKYLLQVMPPADIIPEAIRSIVIHMNITNAAILYDDSFVMDHKYKS 197
                          |..||.:.||:       :.|.:|..:|.....:..:|.::   :|.  ..
Zfish   175 --------------LICAKAECLLR-------LEELVRHFLISRETLSVRMLDEN---LDP--TP 213

  Fly   198 LLQNIQTRHVITAIAKDGKREREEQIEKLRNLDINNFF---ILGTLQSIRMVLESV--------- 250
            ||:.|:...|.|.|...........::|...|.:.:.|   ||.|:....:.|:.|         
Zfish   214 LLKEIRDDKVATIIIDANASVSILILKKASELGMTSAFYKYILTTMDFPLLRLDDVVNDQSNIVG 278

  Fly   251 -------KPAYFE----RNFAWHAITQNEGEISSQRDNATIMFMKPMAYTQYRDRLGLLRTTYNL 304
                   .|.|.|    .|.:|                                |.|...:.|  
Zfish   279 FSMLNNSHPFYLEFIRSLNLSW--------------------------------REGCDLSPY-- 309

  Fly   305 NEEPQLSSAFYFDLALRSFLTIKEMLQS---GAWPKDMEYLNCDD---FQGGNTPQRNLDLRDYF 363
             ..|.||||..||........::|:.:|   |..|     |:|..   :|.|.:....|.:.:| 
Zfish   310 -PGPALSSALMFDAVHVVVGAVRELNRSQEIGVKP-----LSCTSSLIWQHGTSLMNYLRMVEY- 367

  Fly   364 TKITEPTSYGTFDLVTQSTQPFNGHSFMKFEMDINVLQ-IRGGSSVNSKSIGKWIS----GLNS- 422
                        |.:|...: ||... .:....:.:|: .:||    .|.||.|.|    .:|| 
Zfish   368 ------------DGLTGRVE-FNSKG-QRTNYTLRILEKFKGG----HKEIGVWYSNNTLAMNST 414

  Fly   423 ELIVKDEEQMKNLTADTVYRIFTVVQAPFIMRDET-----APKGYKGYCIDLINEIAAIVHFDYT 482
            .|.:...|.:.|.|    ..:.|:::.|::||.|.     ....|:|:|:|::.|:|.|:.|.:.
Zfish   415 SLDINTSETLANKT----LTVTTILENPYVMRKENYQDFQGSDQYEGFCVDMLRELADILKFSFR 475

  Fly   483 IQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMM-- 545
            |:.|:||.:|..:.||.|.|:|.:|::::||:.:...::.:|||.||||:.|:.:| ||:|:.  
Zfish   476 IKLVDDGLYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMNL-GISILYRV 539

  Fly   546 ---QRPSSPSSLFKFLTVLETNVWLCILAAYFFTSFLMWIFDRWSPYSYQNNREKYKD--DEEKR 605
               ::|    ..|.||......|||.:|.||...|.::::..|.|||.:.|....:::  |..:.
Zfish   540 HIGRKP----GYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPFPCWRERRDLLEN 600

  Fly   606 EFNLKECLWFCMTSLTPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVE 670
            ::.|...|||.:.....||....|:.||.|.|:..||.|..|||:||||||||||||.|::.|:|
Zfish   601 QYTLGNSLWFPIGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIE 665

  Fly   671 SLDDLAKQYKILYAPLNGSSAMTYFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSD 735
            |.:|||.|..|.|..:.|.|.||:|                  :|......:|    :|:|    
Zfish   666 SAEDLADQTNIQYGTIQGGSTMTFF------------------MNSRYQTYQR----MWNY---- 704

  Fly   736 KYTKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDIRYLQLTNCDLQVVGEEFSRKPY 800
            .|:|     |.:....:.:|.:|||.||.    :|||.::|...|.:..||:|..:|.....|.|
Zfish   705 MYSK-----QPSVFVKSTEEGIARVLNSK----YAFLLESTMNEYHRRLNCNLTQIGGLLDTKGY 760

  Fly   801 AIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPED-QSDGISIQNIGGVFI 864
            .|.:..||..:|:....||.|....:||.||.:||:.    .||.|.|| ::.|:.:.||||:|:
Zfish   761 GIGMPLGSPFRDEITLGILQLQENNRLEILKRRWWEG----GKCLKEEDHRAKGLGMDNIGGIFV 821

  Fly   865 VIFVGIGMACITLVFEYWWYRYRKNPRIIDVAEANAERSNAADHP 909
            |:..|:.:|....:.|:.|...|           :||......||
Zfish   822 VLICGLIIAVFVAIMEFVWSTRR-----------SAETDEVRPHP 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606 83/437 (19%)
PBP2_iGluR_putative 438..836 CDD:270435 135/409 (33%)
si:ch211-264f5.8XP_017207885.1 PBP1_iGluR_Kainate_KA1_2 35..413 CDD:380616 87/452 (19%)
Periplasmic_Binding_Protein_Type_2 426..796 CDD:473866 137/413 (33%)

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