DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fnta and Ptar1

DIOPT Version :9

Sequence 1:NP_001260048.1 Gene:Fnta / 33682 FlyBaseID:FBgn0031633 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001099230.2 Gene:Ptar1 / 286972 RGDID:708369 Length:425 Species:Rattus norvegicus


Alignment Length:403 Identity:78/403 - (19%)
Similarity:146/403 - (36%) Gaps:130/403 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NPVVSI-------AYSQKFREVFDYMRAIIARGEK----SQRALDLTTDALRLNPANYTVWQYRR 89
            :|:|.:       ::..||...:.:.:.::.|..|    ....:|:|...|.|||...|.|..|:
  Rat    45 SPIVLVENKLGVESWCVKFLLPYVHNKLLLYRTRKQWLHKDELIDVTCTLLLLNPDFTTAWNVRK 109

  Fly    90 DV-----LRELKADLYAELDYLTEVIGQNSKNYQVWHHRRVIVEMLND----PSN---------E 136
            ::     |..:| ||:.....||:.    .|:.:.|.|||.:::.|:.    ||:         .
  Rat   110 ELILSGTLSPVK-DLHLGKLALTKF----PKSPETWIHRRWVLQQLSQETSLPSSVAKGSLGVVP 169

  Fly   137 LELTENALVNDGDA---------KNYHAWQHRQWAIRSFNLYD-----DELSFVDRLISEDQRNN 187
            .|.|:..:..:.:.         .||:||.||.|.:::....|     ||||......|....::
  Rat   170 AERTQRIIQEEMEVCSEAAGRYPSNYNAWSHRIWVLQNVAKLDLKILLDELSSTKHWASVHVSDH 234

  Fly   188 SAWNQRFFVIK--------------HFGF--------------------TPELIQRELSYTMNRI 218
            |.::.|.|::|              |...                    .|:|::.|:.:..:.|
  Rat   235 SGFHYRQFLLKSLISQTTTDNAVPQHNSLKCEPKEAAAAAASAEEPSVSLPQLLEEEVEFCTDLI 299

  Fly   219 RIIKNNESAW----------NYLVG-------VMRQGDSGNALLSSYPDV-----------VDFV 255
            .....:|:.|          ::|.|       .:...|...|.|:....:           ||.:
  Rat   300 DSYPGHETLWCHRRHVFYLQHHLNGRLPPSLTPLSPADCSGAALNDLHQIPTSPQLSQAMEVDGL 364

  Fly   256 EELYQAGNRSPYLLAFLIDLYQEQALQLK---ASDSDQLARKVYGLCEDMATKHDVIRRKYWQYV 317
            .:..:.|             |.::..:||   |.||..|..:...:.:.::|..:|.:.:|    
  Rat   365 SDSSKQG-------------YSQETKRLKRTPAPDSLGLEMEHKFIDQVLSTCRNVEQARY---- 412

  Fly   318 ANHLKNQLSTVEQ 330
            ||..:..|.|:.|
  Rat   413 ANAYRKWLVTLSQ 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FntaNP_001260048.1 PLN02789 14..314 CDD:215423 72/385 (19%)
Ptar1NP_001099230.2 PLN02789 82..346 CDD:215423 54/268 (20%)
PPTA 180..207 CDD:279565 7/26 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1527547at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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