DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fnta and Fnta

DIOPT Version :10

Sequence 1:NP_608862.1 Gene:Fnta / 33682 FlyBaseID:FBgn0031633 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_036979.2 Gene:Fnta / 25318 RGDID:2625 Length:377 Species:Rattus norvegicus


Alignment Length:326 Identity:157/326 - (48%)
Similarity:232/326 - (71%) Gaps:14/326 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DEEYLGTD---WLAYSERSDWEDVQPLAQDDGPNPVVSIAYSQKFREVFDYMRAIIARGEKSQRA 67
            |:.:|..|   ::.|.:|::|.|:.|:.|:|||:|||.|.||:|||:|:||.||::.|.|:|:||
  Rat    52 DDGFLSLDSPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERA 116

  Fly    68 LDLTTDALRLNPANYTVWQYRRDVLRELKADLYAELDYLTEVIGQNSKNYQVWHHRRVIVEMLND 132
            ..||.||:.||.||||||.:||.:||.|:.||..|::|:|.:|.:..|||||||||||:||.|.|
  Rat   117 FKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRRVLVEWLKD 181

  Fly   133 PSNELELTENALVNDGDAKNYHAWQHRQWAIRSFNLYDDELSFVDRLISEDQRNNSAWNQRFFVI 197
            ||.|||...:.|  :.|||||||||||||.|:.|.|:|:||.:||:|:.||.||||.||||.|||
  Rat   182 PSQELEFIADIL--NQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQRHFVI 244

  Fly   198 KH-FGFTPE-LIQRELSYTMNRIRIIKNNESAWNYLVGVMRQGDSGNALLSSYPDVVDFVEELYQ 260
            .: .|::.. :::||:.||:..|:::.:||||||||.|:::  |.|   ||.||::::.:.:| |
  Rat   245 SNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQ--DRG---LSRYPNLLNQLLDL-Q 303

  Fly   261 AGNRSPYLLAFLIDLYQEQALQLKASDSDQLARKVYGLCEDMATKHDVIRRKYWQYVANHLKNQL 325
            ..:.||||:|||:|:| |..|:.:..:.:.:..|...|||.:|.:.|.||::||:|:...|:::.
  Rat   304 PSHSSPYLIAFLVDIY-EDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSKH 367

  Fly   326 S 326
            |
  Rat   368 S 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FntaNP_608862.1 PLN02789 14..314 CDD:215423 149/301 (50%)
FntaNP_036979.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 1/2 (50%)
PLN02789 64..365 CDD:215423 151/302 (50%)
PFTA 1 112..146 20/33 (61%)
PFTA 2 147..181 20/33 (61%)
PFTA 3 182..214 19/31 (61%)
PFTA 4 215..249 20/34 (59%)
PFTA 5 255..289 16/33 (48%)

Return to query results.
Submit another query.