DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3225 and PRP22

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_010929.3 Gene:PRP22 / 856732 SGDID:S000000815 Length:1145 Species:Saccharomyces cerevisiae


Alignment Length:640 Identity:267/640 - (41%)
Similarity:406/640 - (63%) Gaps:16/640 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NMGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITEPR 101
            ::.:..||:.||:...|.:::..:..:|.:::||||||||:||:.|||.|.|:...|:||.|:||
Yeast   473 SLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPR 537

  Fly   102 RVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVIIV 166
            ||:.|::|.|||:|.|..||..|||.:||.:.....|:||:||:|:|.||.|.||.:::|.||::
Yeast   538 RVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIML 602

  Fly   167 DEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFF-SWPGSGEVSVKLSIEGRMH 230
            ||||||.:.||::..||||...||..||:|::|||::::.|||:| :.|       .::|.|:..
Yeast   603 DEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCP-------IINIPGKTF 660

  Fly   231 PVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQE--NL 293
            ||...|...|..||::..::.|..:|..|.|||||.|||||||:....::|.:.:.:....  .|
Yeast   661 PVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGEL 725

  Fly   294 KVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSD 358
            .:||:|.::.|..|..:|...|||:||||.|||||||||||.||.||:|.|:.|:..||.:...:
Yeast   726 LILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIE 790

  Fly   359 SLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSD-YEALAPRQPPEMRRSELSGAILQLKALGI 422
            .|::.|:|:|.|.||.|||||..|||.|||||:|. |..:.....||::|..||..||.|||:||
Yeast   791 QLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGI 855

  Fly   423 GNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGC 487
            .::|:|||..|||...:|:||..|:.|.::|::|.||. :|..::..|....||:.|..|....|
Yeast   856 NDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTN-LGKEMSLFPMDPTLSRSLLSSVDNQC 919

  Fly   488 SEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQ 552
            |:||:|||::|.||::|.||.....:...:.|  ||....||.:|:||.||.:.:...::::|..
Yeast   920 SDEIVTIISMLSVQNVFYRPKDRQLEADSKKA--KFHHPYGDHLTLLNVYTRWQQANYSEQYCKT 982

  Fly   553 YFLIYRNLKRAHSLREQLITVARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQIS 617
            .||.:|:||||..::.| |::..||.|:.:.||..|.:.:.|...:|||...|.......|:.|:
Yeast   983 NFLHFRHLKRARDVKSQ-ISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTIN 1046

  Fly   618 SGTELAIHPNSTLYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQ 672
            .|||:.|||:|:||. .:.:||:|..::.|::.:|:.||.|:.:||.|:|||:|:
Yeast  1047 GGTEVGIHPSSSLYG-KEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYK 1100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 263/631 (42%)
DEXDc 64..202 CDD:238005 72/137 (53%)
HELICc 289..380 CDD:197757 45/92 (49%)
HA2 448..534 CDD:214852 30/85 (35%)
OB_NTP_bind <581..670 CDD:285018 32/88 (36%)
PRP22NP_010929.3 Pnp 1..423 CDD:224106
HrpA 456..1145 CDD:224557 267/640 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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