DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3225 and PRP16

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_013012.3 Gene:PRP16 / 853961 SGDID:S000001794 Length:1071 Species:Saccharomyces cerevisiae


Alignment Length:654 Identity:270/654 - (41%)
Similarity:404/654 - (61%) Gaps:29/654 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGW-HTKG-LIGITEPRRVSTV 106
            :|:||:.:.|.|:|..:.::|||:::|||||||:||:.|||||.|: :.:| .|.:|:||||:.:
Yeast   347 KEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVAAI 411

  Fly   107 TLANRVAQERGELVGDTVGYVVRFLE-SMSSCTKIKFMTEGILLREVLADPLLTQYGVIIVDEAH 170
            ::|.|||.|....:|..|||.:||.: :.|.|||:||:|:||||||.|.|..|.:|..:|:||||
Yeast   412 SVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAH 476

  Fly   171 ERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNF 235
            ||::.||::||..|.:|.:|..|||||:|||::|..||.||   |:   :.:.:|.||..||...
Yeast   477 ERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFF---GN---APQFTIPGRTFPVQTI 535

  Fly   236 YLNEPCADYVKETVETVWKLHQKE--PPGDILAFLTGQEEVLEALDLLREYI----------ASS 288
            |.:.|..|||:..|....|:|...  ..||||.|:||||::....|.|:|..          |:.
Yeast   536 YTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANF 600

  Fly   289 EQEN-LKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYN 352
            |:.| :::||:|.::.:..|..:|.......||:::||||||||:||.||.|||||||.|:|.||
Yeast   601 EEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYN 665

  Fly   353 PKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDY-EALAPRQPPEMRRSELSGAILQ 416
            ||...|||||.|:|||:|.||:|||||..||..|||||:..: |.:..:..||::|:.||..:|.
Yeast   666 PKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLL 730

  Fly   417 LKALGIGNIL-RFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLY 480
            ||:|.:.:.| :|.|...||.|..||:|..|:.:.|||..|.|| |:|..:|:.|....|||:|.
Yeast   731 LKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLT-PLGLQMAKFPLQPSLSKILL 794

  Fly   481 VSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGM 545
            ::.:.|||:|::||:::|.|..:|.||..  .|:...||..||.:|:.|.:|:||.:..:.....
Yeast   795 IAVRNGCSDEMLTIVSMLSVPQVFYRPKE--RQKEADIARNKFFIAKSDHLTLLNVFEQWRANNF 857

  Fly   546 TKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHS 610
            :..:|.::|:.|::|.||..:|:||:|:. |...||:.|...|.:.:.|||.:||..|.|.:...
Yeast   858 SSHWCNKHFVQYKSLVRARDIRDQLLTIL-KSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGL 921

  Fly   611 GVYRQISSGTELAIHPNSTLYTLPQ-AQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQQT 674
            ..|..:.:|..:.:||.|.|:.|.. ..||||.|||.|:|.::..||.:...||.|.....|...
Yeast   922 RNYVHLKTGVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIK 986

  Fly   675 TVRD 678
            .:::
Yeast   987 RIKN 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 269/642 (42%)
DEXDc 64..202 CDD:238005 74/140 (53%)
HELICc 289..380 CDD:197757 50/91 (55%)
HA2 448..534 CDD:214852 33/85 (39%)
OB_NTP_bind <581..670 CDD:285018 31/89 (35%)
PRP16NP_013012.3 HrpA 319..1071 CDD:224557 270/654 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.710

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