DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3225 and AT1G27900

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_564296.1 Gene:AT1G27900 / 839683 AraportID:AT1G27900 Length:700 Species:Arabidopsis thaliana


Alignment Length:656 Identity:244/656 - (37%)
Similarity:390/656 - (59%) Gaps:56/656 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITEPRRVSTVTLANR 111
            |||.|:.::|:..:||:.||:::||||||||||:.|.|:..|:...|:|.||:||||:.|::|.|
plant     4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAVSVARR 68

  Fly   112 VAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLT 176
            ||||....:|:.|||.:||.:..:|.|:||::|:|:||||.|::|:|..|.|||:||||||::.|
plant    69 VAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIILDEAHERSLNT 133

  Fly   177 DMILGLLKKILRKR-SSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEP 240
            |::|||:|:::|.| |:.|::|:|||:|....|||||.      ...|::.|:::||...|..|.
plant   134 DILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSG------CPVLNVPGKLYPVEILYSKER 192

  Fly   241 CADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLK---VLPMYGSM 302
            ...|::.:::....:|.:||.||||.|:|||:::.:.:..|.|.:.|..:.:..   :.|::||:
plant   193 PVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSL 257

  Fly   303 SSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSK 367
            ....|:.||..||...|:.:::|||||||:|:.|:|||||.||||.:.|||.:...||.::.:||
plant   258 PPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISK 322

  Fly   368 ASAIQRAGRAGRMRPGKVYRLYTKSDY-EALAPRQPPEMRRSELSGAILQLKALGIG--NILRFD 429
            ..|.||||||||.||||.||||..:.| :.......||::|:.|:|::|.||:|.:.  :||:||
plant   323 VQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFD 387

  Fly   430 FPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITI 494
            |...|.:::|..||:.|:.:|||||.|.:|: :|..:::||....||:.|..:.:.||..:.:|:
plant   388 FLDAPSSESLEDALKQLYFIDAIDENGAITR-IGRTMSDLPLEPSLSRTLIEANETGCLSQALTV 451

  Fly   495 IALLQVQSIF----SRPA---------SAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMT 546
            :|:|..::..    |:|:         |.:...||          .||.|.:|..:..:......
plant   452 VAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSG----------YGDHIQLLQIFESWDRTNYD 506

  Fly   547 KEFCGQYFLIYRNLKRAHSLREQLITVARK--KYGIPI------FSCKGDVEKLCKCITAGFFTQ 603
            ..:|.:..:..|.:.....:|.||..:.:|  |..:.:      .|.:.|..||.|.:..|...|
plant   507 PVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQ 571

  Fly   604 VA--YLHHSGVYRQISSGTELA-IHPNSTLYT-----LPQAQYVVYGELLQTTKLFMNYVTVIKR 660
            :|  .|.|:| ||.:|..::|. :||:|.|..     :|  .||||.||:.||:.||..|..:..
plant   572 IAERMLRHNG-YRTLSFQSQLVQVHPSSVLSADNDGMMP--NYVVYHELISTTRPFMRNVCAVDM 633

  Fly   661 EWLTEL 666
            .|:..:
plant   634 AWVAPI 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 244/656 (37%)
DEXDc 64..202 CDD:238005 72/138 (52%)
HELICc 289..380 CDD:197757 42/93 (45%)
HA2 448..534 CDD:214852 26/98 (27%)
OB_NTP_bind <581..670 CDD:285018 32/100 (32%)
AT1G27900NP_564296.1 HrpA 3..639 CDD:224557 244/654 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.780

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