DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3225 and AT4G18465

DIOPT Version :10

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_567558.2 Gene:AT4G18465 / 827579 AraportID:AT4G18465 Length:695 Species:Arabidopsis thaliana


Alignment Length:700 Identity:317/700 - (45%)
Similarity:455/700 - (65%) Gaps:41/700 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTFKPKFLKPETDDAITDSAGG---------EQQSSAFVFNVNHNMGLMEQRERLPIRQYRDQI 56
            |:.:||...||..::   |..||         ...||::.:     ..:.:||:|||:.:||.:|
plant     1 MAFWKPGTEKPRFEE---DGEGGIVFMSNNLASSSSSSYGY-----ANIEKQRQRLPVYKYRTEI 57

  Fly    57 LYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKG-LIGITEPRRVSTVTLANRVAQERGELV 120
            ||.:|.|...|:||||||||:||:||||.|.||...| :|..|:|||::...::.|||:|.|..:
plant    58 LYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQAVSARVAEEMGVNL 122

  Fly   121 GDTVGYVVRFLE-SMSSCTKIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLK 184
            |:.|||.:||.: :.|..|.:||:|:|:|:||::.|||||:|.||::||||||::.||::|||||
plant   123 GEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMIDEAHERSISTDILLGLLK 187

  Fly   185 KILRKRSSLKLIISSATIDASFFSEFF-----------SWPGSGEVSVKLSIEGRMHPVSNFYLN 238
            ||.|:|..|:||||||||:|...|.||           |.||.......||:|||...|...|:.
plant   188 KIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHAPEGSTPGPKLEPAILSVEGRGFSVKIHYVE 252

  Fly   239 EPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQEN---LKVLPMYG 300
            ||.:||::..|.|:..::::|||||:|.||||||::..|:.||.|. |.|.|:|   |..||:|.
plant   253 EPVSDYIRSVVSTILLINEREPPGDVLVFLTGQEDIETAIKLLEEE-AHSNQKNSSGLLPLPLYS 316

  Fly   301 SMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPV 365
            .:|.::|..:|...|:|.|||:|:|||||||:|:.|:|||||.|:.|.|:|||.:..:|||:.|:
plant   317 GLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPI 381

  Fly   366 SKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQP-PEMRRSELSGAILQLKALGIGNILRFD 429
            |||||.||:|||||:||||.|||||:..:....|.:. |||:||.|...::|||||||.|||.||
plant   382 SKASARQRSGRAGRVRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGFD 446

  Fly   430 FPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITI 494
            :|:||.::.::.|||.|::|..:|:...||.|.|:.:||||...|:|||:..|.::|||.|||||
plant   447 WPAPPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITI 511

  Fly   495 IALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRN 559
            .|:|.|||::........:|..  |..:|..||||.:|.||.|.||:|.....::|.:.||.|::
plant   512 AAVLSVQSVWIIARGVQKEQDE--AKLRFAAAEGDHVTFLNVYKGFLESKKPTQWCYKNFLNYQS 574

  Fly   560 LKRAHSLREQLITVARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYL--HHSGVYRQISSGTEL 622
            :|:...:|:||..:|| :.||.:.||.||:|.:.|.:|||||.....|  |.:|||:.|....|:
plant   575 MKKVVEIRDQLKRIAR-RLGITLKSCDGDMEAVRKAVTAGFFANACRLEPHSNGVYKTIRGSEEV 638

  Fly   623 AIHPNSTLYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQ 672
            .|||:|.|:.: ..::|||..::.|.:.:|..|..|...||||:|||:||
plant   639 YIHPSSVLFRV-NPKWVVYQSIVSTERQYMRNVVTINPSWLTEVAPHFYQ 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 38..>669 CDD:441249 303/649 (47%)
AT4G18465NP_567558.2 HrpA 48..>684 CDD:441249 300/640 (47%)

Return to query results.
Submit another query.