DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3225 and AT4G16680

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_001329688.1 Gene:AT4G16680 / 827370 AraportID:AT4G16680 Length:796 Species:Arabidopsis thaliana


Alignment Length:653 Identity:290/653 - (44%)
Similarity:411/653 - (62%) Gaps:39/653 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITEPRRVSTV 106
            |.||.|||..||:::|..:|::||:::||||||||:||:||||.|.|:..:|.||.|:||||:.:
plant   130 EGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAM 194

  Fly   107 TLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVIIVDEAHE 171
            ::|:|||||.|..:|..|||.:||.:..|..|.||:||:|:||||:|.:|.|..|.|||:|||||
plant   195 SVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHE 259

  Fly   172 RNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFY 236
            |.:.||::..|:|.:.:.|..|:|||||||::|..|||:|.   |..:.:   |.||.:||...:
plant   260 RTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFD---SARIYL---IPGRRYPVEKLF 318

  Fly   237 LNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLK------- 294
            ...|..||::..:.||.::||.|..||||.|||||||:            .:.:.|||       
plant   319 RKCPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQEEI------------ETVETNLKRRMMDLG 371

  Fly   295 -------VLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYN 352
                   :.|:|.::.:..|..||...|||||||||||||||||:||.|:.||||.||.|:..||
plant   372 TKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYN 436

  Fly   353 PKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQL 417
            |:|..:||::.|:|||||.|||||:||..|||.:|||...|.|   |...||::|:.|:..:|.|
plant   437 PRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYNIKDLE---PTTIPEIQRANLASVVLTL 498

  Fly   418 KALGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVS 482
            |:|||.::..|||..|||...||.|||.|:||.|:||.|.:|| ||..:.|.|...|||||:..|
plant   499 KSLGIQDVFNFDFMDPPPENALLKALELLYALGALDEIGEITK-VGERMVEFPVDPMLSKMIVGS 562

  Fly   483 GQMGCSEEIITIIALLQV-QSIFSRPAS-AVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGM 545
            .:..||:|||||.|:|.| .|:|.||.: .|.....|:...:.....||.|.:|..|..:.||..
plant   563 EKYKCSKEIITIAAMLSVGNSVFYRPKNQQVFADKARMDFYEDTENVGDHIALLRVYNSWKEENY 627

  Fly   546 TKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHS 610
            :.::|.:.|:..:::|||..:|:||:.:. .|.|:.:.|...|::.:.|.|.||||...|.|..:
plant   628 STQWCCEKFIQSKSMKRARDIRDQLLGLL-NKIGVELTSNPNDLDAIKKAILAGFFPHSAKLQKN 691

  Fly   611 GVYRQISSGTELAIHPNSTLYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQQTT 675
            |.||::.....:.:||||.|:....::::||.||:.|||.:|.:.|.:|.|||.|:|||||:...
plant   692 GSYRRVKEPQTVYVHPNSGLFGASPSKWLVYHELVLTTKEYMRHTTEMKPEWLIEIAPHYYKLKD 756

  Fly   676 VRD 678
            :.|
plant   757 IED 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 284/641 (44%)
DEXDc 64..202 CDD:238005 75/137 (55%)
HELICc 289..380 CDD:197757 53/104 (51%)
HA2 448..534 CDD:214852 37/87 (43%)
OB_NTP_bind <581..670 CDD:285018 34/88 (39%)
AT4G16680NP_001329688.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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