DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3225 and AT2G47250

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_182247.1 Gene:AT2G47250 / 819338 AraportID:AT2G47250 Length:729 Species:Arabidopsis thaliana


Alignment Length:658 Identity:271/658 - (41%)
Similarity:411/658 - (62%) Gaps:44/658 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYE------------WGWHTK 92
            ::|:|..||:...:|..|..|..:|.:||||||||||:||:||::.:            |     
plant    58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW----- 117

  Fly    93 GLIGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPL 157
             |:|.|:||||:.::::.|||.|....:|:.|||.:||.:..||.|.:|::|:|:||||.:||||
plant   118 -LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPL 181

  Fly   158 LTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVK 222
            |.:|.|||:||||||.:.||::.||||::||.|..|||::.|||::|..|.|:|    ||...:|
plant   182 LERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYF----SGAPLMK 242

  Fly   223 LSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIAS 287
              :.||:|||..||..||..||::..:.||.::|..|||||||.||||:||:.:|...:.:.:::
plant   243 --VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSN 305

  Fly   288 --SEQENLKVLPMYGSMSSTDQLSVFFTPP-------KGTRKVVLATNIAETSITIPGIVYVIDC 343
              .:...:||:|:|.::....|..:|...|       ...||:|::|||||||:||.|||||||.
plant   306 LGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDP 370

  Fly   344 GYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYT-KSDYEALAPRQPPEMRR 407
            |:.|.|.|||:...:||::.|:|||||.||:|||||.||||.:|||| ||....|.|:..||:.|
plant   371 GFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILR 435

  Fly   408 SELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFS 472
            |.|:..:|.||.|||.:::.|||..||..:.|:.|||.|..|.|:|::||||| .|.:::|.|..
plant   436 SNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTK-TGEIMSEFPLD 499

  Fly   473 AMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAY 537
            ..:||||.||.:..||.||:::.|:|.|.:.|.||..  ||::...|..:|...:||.:|:||.|
plant   500 PQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPRE--AQKAADEAKARFGHIDGDHLTLLNVY 562

  Fly   538 TGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPI----FSCKGDVEKLCKCITA 598
            ..:.:......:|.:.|:..|.:|.|.::|:||:.: ..::.:.:    |:.:.....:.|.:.|
plant   563 HAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRI-MSRFNLKMCSTDFNSRDYYVNIRKAMLA 626

  Fly   599 GFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWL 663
            |:|.|||:|..:|.|..:.....:.:||::.|...|  ::|:|.|.:.||:.|:..||.|:.|||
plant   627 GYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKP--EWVIYNEYVLTTRNFIRTVTDIRGEWL 689

  Fly   664 TELAPHYY 671
            .::|.|||
plant   690 VDVAQHYY 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 267/653 (41%)
DEXDc 64..202 CDD:238005 72/149 (48%)
HELICc 289..380 CDD:197757 46/97 (47%)
HA2 448..534 CDD:214852 34/85 (40%)
OB_NTP_bind <581..670 CDD:285018 28/92 (30%)
AT2G47250NP_182247.1 HrpA 40..711 CDD:224557 271/658 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

Return to query results.
Submit another query.