DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3225 and tdrd9

DIOPT Version :10

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:XP_012824154.2 Gene:tdrd9 / 780352 XenbaseID:XB-GENE-5893104 Length:1346 Species:Xenopus tropicalis


Alignment Length:571 Identity:173/571 - (30%)
Similarity:277/571 - (48%) Gaps:97/571 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GEQQSSAFVFNVNHNMGLMEQRE---------------------------------RLPIRQYRD 54
            |.|..:|:|    ....|:|:||                                 .|||.:.|:
 Frog    51 GLQSENAYV----KEFRLVEERELEKYKSCSANTARTRKISTFDALTMPEFDPKYPELPILKSRE 111

  Fly    55 QILYCLEKHQVVILVGETGSGKSTQVPQ----YLYEWGWHTKGLIGITEPRRVSTVTLANRVAQE 115
            :::..:|.:.||::.|.||||||||:||    ||.:.|.:..  |.:|:||:::..::|..::.:
 Frog   112 ELIALIENNSVVVIHGATGSGKSTQLPQFILDYLRQHGQYCN--IVVTQPRKIAARSIATWISNQ 174

  Fly   116 RGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMIL 180
            |...:|..|||.|...:..|..|::.:||.|:||:::::...|.::..|.:||.|||....|.:|
 Frog   175 RCWTLGGRVGYQVGLEKVASEETQLIYMTTGVLLQKIVSAKSLLEFTHIFIDEVHERTEEMDFLL 239

  Fly   181 GLLKKILRKRSS-LKLIISSATIDASFFSEFFSWPGSGEVSVK--LSIEGRMHPVSNFYLNE--- 239
            .:::|:|...|. :|:|:.||||:...|:::|:.|...:::..  ..:||:.|.:..|||::   
 Frog   240 MVVRKLLCTNSRFVKVILMSATINCKEFADYFAVPVLNKMTPAYIFEVEGKPHDIEVFYLDDLKD 304

  Fly   240 -PCADYV----------KETVETVWKL-H-----QKE-------------PPGDILAFLTGQEEV 274
             |.|...          ||..|....| |     :||             ....:|.||.|..|:
 Frog   305 IPQAKIAAHYSDEPLISKEMYEVATSLIHLFDEMEKEELKKGKMSHKAYIESNSVLVFLPGLMEI 369

  Fly   275 LEALDLLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVY 339
                :.:.|...:..|:.|.|.|::.|::..:|..||..|..|.|||:|:|||||:|||:|.:.|
 Frog   370 ----NYMHELFTNMVQKRLHVYPLHSSITLDEQNLVFMPPVIGYRKVILSTNIAESSITVPDVKY 430

  Fly   340 VIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQP-P 403
            |||....|....:.:|...||.:...||.:..||.|||||:..|..||...|..::.:.|... |
 Frog   431 VIDFCLTKTLVCDEETNYQSLRLSWASKTNCDQRKGRAGRVSKGYCYRFVQKDFWKNIIPENVIP 495

  Fly   404 EMRRSELSGAILQLKALGIG--NILRFDFPSPP---PAQNLLSALESLFALDAIDEQ-------G 456
            ||.||.|...||::|.|.:|  ..|.....|||   ..:..:..|:.|.||....::       |
 Frog   496 EMLRSPLGSTILKVKLLDMGEPRALLATALSPPNITDIERTILLLKELGALAVSGKRENENPYDG 560

  Fly   457 NLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRP 507
            .||. :|.:||:||....|.|::.:....||.||.|.|.|.|.:::.|:.|
 Frog   561 ELTF-LGKVLAQLPVDLQLGKLIVLGHVFGCLEECIIIAAALSLKNFFAMP 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 38..>669 CDD:441249 169/556 (30%)
tdrd9XP_012824154.2 HrpA 102..>685 CDD:441249 165/516 (32%)
Tudor_TDRD9 872..972 CDD:410502
Blue background indicates that the domain is not in the aligned region.

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