Sequence 1: | NP_608860.1 | Gene: | CG3225 / 33680 | FlyBaseID: | FBgn0031631 | Length: | 678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004910524.1 | Gene: | ythdc2 / 779469 | XenbaseID: | XB-GENE-5881731 | Length: | 1457 | Species: | Xenopus tropicalis |
Alignment Length: | 868 | Identity: | 222/868 - (25%) |
---|---|---|---|
Similarity: | 351/868 - (40%) | Gaps: | 272/868 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 RERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGL---IGITEPRRVST 105
Fly 106 VTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVL-ADPLLTQYGVIIVDEA 169
Fly 170 HERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSN 234
Fly 235 FYL----------NEPCADYVKE--------TVETVW-----------KLHQKEPPG-----DIL 265
Fly 266 ----------------------------------------------------------------- 265
Fly 266 ----------AFLTGQEEVL--------------------------EALDLLREYIASSEQENL- 293
Fly 294 ----------------------------------------------------------------- 293
Fly 294 -------------------KVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVY 339
Fly 340 VIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPE 404
Fly 405 MRRSELSGAILQLKALGIGNILRFDF----PSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYL 465
Fly 466 LAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAE-GD 529
Fly 530 FITMLNAYTGFVE---EGMTKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPIFSCKGDVEK 591
Fly 592 LCKCITAGFFTQVAYLHHSGVY---------RQISSGTE---LAIHPNSTL-----YTLPQA--- 636
Fly 637 ---------QYVVYGELLQTTKL 650 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3225 | NP_608860.1 | HrpA | 40..668 | CDD:224557 | 222/868 (26%) |
DEXDc | 64..202 | CDD:238005 | 62/141 (44%) | ||
HELICc | 289..380 | CDD:197757 | 45/175 (26%) | ||
HA2 | 448..534 | CDD:214852 | 23/86 (27%) | ||
OB_NTP_bind | <581..670 | CDD:285018 | 18/99 (18%) | ||
ythdc2 | XP_004910524.1 | R3H_DEXH_helicase | 76..134 | CDD:100077 | |
HrpA | 219..>1046 | CDD:224557 | 217/836 (26%) | ||
ANK repeat | 535..567 | CDD:293786 | 3/31 (10%) | ||
ANK repeat | 569..600 | CDD:293786 | 8/30 (27%) | ||
OB_NTP_bind | 1001..1096 | CDD:369483 | 15/76 (20%) | ||
YTH | 1316..1447 | CDD:367840 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |