DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3225 and spn-E

DIOPT Version :9

Sequence 1:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_476741.1 Gene:spn-E / 41919 FlyBaseID:FBgn0003483 Length:1434 Species:Drosophila melanogaster


Alignment Length:773 Identity:222/773 - (28%)
Similarity:332/773 - (42%) Gaps:175/773 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DDAITDSAGGE-------QQSSAFVFNVNHNMGLMEQRERLPIRQYRDQILYCLEKHQVVILVGE 71
            ||..||..|.|       :....|.||:|.:       :.|.|...|::||..:..|.|||:.||
  Fly    82 DDLDTDDEGEETEIRRDDEYYKKFRFNLNRD-------KNLSIYAKREEILAAINAHPVVIIKGE 139

  Fly    72 TGSGKSTQVPQYL----YEWGWHTKGLIGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLE 132
            ||.||:||||||:    |:.|.:..  |.:|:|||::.:::||||.||| |...:||......|.
  Fly   140 TGCGKTTQVPQYILDEAYKSGKYCN--IVVTQPRRIAAISIANRVCQER-EWQQNTVCSFQVGLH 201

  Fly   133 SMSSC--TKIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRS-SLK 194
            ..:|.  |::.:.|.|:||..::.:..||.|..|::||.|||:...|.:|.:::::|...| .:|
  Fly   202 RPNSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVK 266

  Fly   195 LIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKL---- 255
            :|:.||||||...|::|:...|....:..: ..|.|.:..||.:        :....:|..    
  Fly   267 IILMSATIDAKELSDYFTTTNSIPPVITTN-HRRKHSIEKFYRD--------QLGSIIWNEEDVG 322

  Fly   256 HQKEPP-------------------------------------GDILAFLTGQEEVLEALDLLRE 283
            ||:.|.                                     |.:|.||.|..|:    |.:.|
  Fly   323 HQQVPEINKHGYRAAVKIIVIIDNMERKAAIQSRQSYDEALRYGAVLIFLPGIYEI----DTMAE 383

  Fly   284 YIAS--SEQENLKV--LPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCG 344
            .:..  ....|:||  :..:..|:..:|..||..||.|.||::|.|||||:|||:|.:.||||..
  Fly   384 NLTCMLENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFC 448

  Fly   345 YVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPR-QPPEMRRS 408
            ..|||..:..:...||.:...|||:..|||||.||:|.|:|||:..|..|:...|. ..|||.|.
  Fly   449 LAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRL 513

  Fly   409 ELSGAILQLKALGIGN---ILRFDFPSPP---PAQNLLSALESLFAL--------DAIDEQGNLT 459
            .|..::|:.|.|.:|:   ||.... |||   ...|.:..|:.:.||        |.:|  |:||
  Fly   514 PLQNSVLKAKVLNMGSPVEILALAL-SPPNLSDIHNTILLLKEVGALYLTVDGIYDPLD--GDLT 575

  Fly   460 KPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRI------ 518
            . .|.:::.||.....|:::.:.......||.|.|.|.|....:|       |.:.||.      
  Fly   576 Y-WGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPGLF-------AHEGGRSQLGDSF 632

  Fly   519 -AHRKFEVAEGD--------FITMLNAYTGFVEEGMTKE----FCGQYFLIYRNLKRAHSLREQL 570
             .|..|....|.        ::|.||    .||.|..:|    :..::.:..|:||..|.|.::|
  Fly   633 WMHYIFSDGSGSDLVAIWRVYLTYLN----IVENGHDQESAIRWAKRFHVSLRSLKEIHLLVQEL 693

  Fly   571 ITVARKKYGIPIF-----SCKGDVEK--LCKCITAGFFTQVAYLHHS---------GVYRQISSG 619
             .|.....|:..|     ....|.||  :.|.|.||.| ...|...|         .:|:.||. 
  Fly   694 -RVRCTHLGLIPFPVNPNQMMDDREKAIMLKVIIAGAF-YPNYFTRSKESCADTDRNIYQTISG- 755

  Fly   620 TELAIH-PNSTLYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQQTTV 676
                 | |..|:|                   |.|:......|..|......:|:..:
  Fly   756 -----HDPCRTVY-------------------FTNFKPAYMGELYTRRIKELFQEVRI 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3225NP_608860.1 HrpA 40..668 CDD:224557 211/730 (29%)
DEXDc 64..202 CDD:238005 56/144 (39%)
HELICc 289..380 CDD:197757 40/92 (43%)
HA2 448..534 CDD:214852 25/108 (23%)
OB_NTP_bind <581..670 CDD:285018 22/105 (21%)
spn-ENP_476741.1 HrpA 113..>697 CDD:224557 188/615 (31%)
TUDOR 892..1016 CDD:395449
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468041
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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